RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 HIVEP3Q5T1R4 2406 aa17.46■□□□□ 0.38
SPIDR-220ENST00000522900 SYCE1LA8MT33 242 aa17.45■□□□□ 0.38
SPIDR-220ENST00000522900 CLDN4O14493 209 aa17.45■□□□□ 0.38
SPIDR-220ENST00000522900 KLK8O60259 260 aa17.45■□□□□ 0.38
SPIDR-220ENST00000522900 UNC5CO95185 931 aa17.45■□□□□ 0.38
SPIDR-220ENST00000522900 SP1P08047 785 aa17.45■□□□□ 0.38
SPIDR-220ENST00000522900 ATP5A1P25705 553 aaKnown RBP17.45■□□□□ 0.38
SPIDR-220ENST00000522900 HPDP32754 393 aaPredicted RBP17.45■□□□□ 0.38
SPIDR-220ENST00000522900 SERPINB8P50452 374 aa17.45■□□□□ 0.38
SPIDR-220ENST00000522900 GPR143P51810 404 aa17.45■□□□□ 0.38
SPIDR-220ENST00000522900 CCDC91Q7Z6B0 441 aa17.45■□□□□ 0.38
SPIDR-220ENST00000522900 ZNF595Q8IYB9 648 aa17.45■□□□□ 0.38
SPIDR-220ENST00000522900 B3GNT7Q8NFL0 401 aa17.45■□□□□ 0.38
SPIDR-220ENST00000522900 KCNC2Q96PR1 638 aa17.45■□□□□ 0.38
SPIDR-220ENST00000522900 SORBS1Q9BX66 1292 aaKnown RBP17.45■□□□□ 0.38
SPIDR-220ENST00000522900 DEFB126Q9BYW3 111 aa17.45■□□□□ 0.38
SPIDR-220ENST00000522900 OR51B5Q9H339 312 aa17.45■□□□□ 0.38
SPIDR-220ENST00000522900 COPS7BQ9H9Q2 264 aaPredicted RBP17.45■□□□□ 0.38
SPIDR-220ENST00000522900 PRM3Q9NNZ6 103 aa17.45■□□□□ 0.38
SPIDR-220ENST00000522900 ICE1Q9Y2F5 2266 aa17.44■□□□□ 0.38
SPIDR-220ENST00000522900 TRBV11-1A0A0K0K1C0 115 aa17.44■□□□□ 0.38
SPIDR-220ENST00000522900 PRKNO60260 465 aaPredicted RBP17.44■□□□□ 0.38
SPIDR-220ENST00000522900 CTNSO60931 367 aa17.44■□□□□ 0.38
SPIDR-220ENST00000522900 SIX3O95343 332 aaPredicted RBP17.44■□□□□ 0.38
SPIDR-220ENST00000522900 CTAGE8P0CG41 777 aa17.44■□□□□ 0.38
SPIDR-220ENST00000522900 GFAPP14136 432 aa17.44■□□□□ 0.38
SPIDR-220ENST00000522900 CD46P15529 392 aa17.44■□□□□ 0.38
SPIDR-220ENST00000522900 ALDH18A1P54886 795 aaKnown RBP17.44■□□□□ 0.38
SPIDR-220ENST00000522900 TGM3Q08188 693 aa17.44■□□□□ 0.38
SPIDR-220ENST00000522900 NAA30Q147X3 362 aaPredicted RBP17.44■□□□□ 0.38
SPIDR-220ENST00000522900 DEPDC1Q5TB30 811 aa17.44■□□□□ 0.38
SPIDR-220ENST00000522900 GRHL2Q6ISB3 625 aa17.44■□□□□ 0.38
SPIDR-220ENST00000522900 SLC25A25Q6KCM7 469 aa17.44■□□□□ 0.38
SPIDR-220ENST00000522900 MAMDC2Q7Z304 686 aaPredicted RBP17.44■□□□□ 0.38
SPIDR-220ENST00000522900 GALNTL5Q7Z4T8 443 aa17.44■□□□□ 0.38
SPIDR-220ENST00000522900 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.44■□□□□ 0.38
SPIDR-220ENST00000522900 FJX1Q86VR8 437 aa17.44■□□□□ 0.38
SPIDR-220ENST00000522900 CTAGE4Q8IX94 777 aa17.44■□□□□ 0.38
SPIDR-220ENST00000522900 ARMC10Q8N2F6 343 aa17.44■□□□□ 0.38
SPIDR-220ENST00000522900 ACOT4Q8N9L9 421 aa17.44■□□□□ 0.38
SPIDR-220ENST00000522900 MNS1Q8NEH6 495 aa17.44■□□□□ 0.38
SPIDR-220ENST00000522900 HUS1BQ8NHY5 278 aa17.44■□□□□ 0.38
SPIDR-220ENST00000522900 UBE2E3Q969T4 207 aa17.44■□□□□ 0.38
SPIDR-220ENST00000522900 NCLNQ969V3 563 aa17.44■□□□□ 0.38
SPIDR-220ENST00000522900 FMO2Q99518 471 aa17.44■□□□□ 0.38
SPIDR-220ENST00000522900 TBCDQ9BTW9 1192 aa17.44■□□□□ 0.38
SPIDR-220ENST00000522900 LIN28AQ9H9Z2 209 aaKnown RBP17.44■□□□□ 0.38
SPIDR-220ENST00000522900 CPSF2Q9P2I0 782 aaKnown RBP17.44■□□□□ 0.38
SPIDR-220ENST00000522900 SEC14L3Q9UDX4 400 aa17.44■□□□□ 0.38
SPIDR-220ENST00000522900 PPIEQ9UNP9 301 aaKnown RBP17.44■□□□□ 0.38
SPIDR-220ENST00000522900 ANGPTL3Q9Y5C1 460 aa17.44■□□□□ 0.38
SPIDR-220ENST00000522900 HIST1H1TP22492 207 aaPredicted RBP17.43■□□□□ 0.38
SPIDR-220ENST00000522900 EEF1DP29692 281 aaKnown RBP17.43■□□□□ 0.38
SPIDR-220ENST00000522900 CLCN2P51788 898 aa17.43■□□□□ 0.38
SPIDR-220ENST00000522900 DDX39BQ13838 428 aaKnown RBP17.43■□□□□ 0.38
SPIDR-220ENST00000522900 PCBP2Q15366 365 aaKnown RBP eCLIP17.43■□□□□ 0.382e-6■■■■□ 25.4
SPIDR-220ENST00000522900 MAPKAPK3Q16644 382 aa17.43■□□□□ 0.38
SPIDR-220ENST00000522900 TMEM35AQ53FP2 167 aa17.43■□□□□ 0.38
SPIDR-220ENST00000522900 GLE1Q53GS7 698 aaKnown RBP17.43■□□□□ 0.38
SPIDR-220ENST00000522900 TECRLQ5HYJ1 363 aa17.43■□□□□ 0.38
SPIDR-220ENST00000522900 KHDRBS2Q5VWX1 349 aaKnown RBP17.43■□□□□ 0.38
SPIDR-220ENST00000522900 C16orf47Q6ZP98 133 aaPredicted RBP17.43■□□□□ 0.38
SPIDR-220ENST00000522900 CEP128Q6ZU80 1094 aa17.43■□□□□ 0.38
SPIDR-220ENST00000522900 CHSY3Q70JA7 882 aa17.43■□□□□ 0.38
SPIDR-220ENST00000522900 GOLGA7Q7Z5G4 137 aa17.43■□□□□ 0.38
SPIDR-220ENST00000522900 MYLK4Q86YV6 388 aaPredicted RBP17.43■□□□□ 0.38
SPIDR-220ENST00000522900 ADAMTS18Q8TE60 1221 aa17.43■□□□□ 0.38
SPIDR-220ENST00000522900 SREK1Q8WXA9 508 aaKnown RBP17.43■□□□□ 0.38
SPIDR-220ENST00000522900 PAFAH2Q99487 392 aa17.43■□□□□ 0.38
SPIDR-220ENST00000522900 MTERF1Q99551 399 aaKnown RBP17.43■□□□□ 0.38
SPIDR-220ENST00000522900 ALOXE3Q9BYJ1 711 aa17.43■□□□□ 0.38
SPIDR-220ENST00000522900 TSPAN10Q9H1Z9 355 aaPredicted RBP17.43■□□□□ 0.38
SPIDR-220ENST00000522900 TRIM45Q9H8W5 580 aaPredicted RBP17.43■□□□□ 0.38
SPIDR-220ENST00000522900 LYRM4Q9HD34 91 aa17.43■□□□□ 0.38
SPIDR-220ENST00000522900 FBXW2Q9UKT8 454 aa17.43■□□□□ 0.38
SPIDR-220ENST00000522900 MRPS33Q9Y291 106 aaKnown RBP17.43■□□□□ 0.38
SPIDR-220ENST00000522900 POLEQ07864 2286 aa17.43■□□□□ 0.38
SPIDR-220ENST00000522900 MAST4O15021 2626 aa17.43■□□□□ 0.38
SPIDR-220ENST00000522900 SPTAN1Q13813 2472 aaKnown RBP17.42■□□□□ 0.38
SPIDR-220ENST00000522900 CCDC189A1A4V9 331 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 ASPDHA6ND91 283 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 TMEM200CA6NKL6 621 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 POC1B-GALNT4F8VUJ3 575 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 ZG16O60844 167 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 LDB3O75112 727 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 SLC25A12O75746 678 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 IFNA16P05015 189 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 INHBAP08476 426 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 TRHRP34981 398 aaPredicted RBP17.42■□□□□ 0.38
SPIDR-220ENST00000522900 MAGEA12P43365 314 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 CYB561P49447 251 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 ID2Q02363 134 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 TERF2Q15554 542 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 AP5B1Q2VPB7 878 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 RNFT1Q5M7Z0 435 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 LIPJQ5W064 366 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 OR4C11Q6IEV9 310 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 KLC3Q6P597 504 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 HORMAD2Q8N7B1 307 aa17.42■□□□□ 0.38
SPIDR-220ENST00000522900 ZNF321PQ8N8H1 164 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms