RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 GSTA1P08263 222 aa16.74■□□□□ 0.27
CLK4-211ENST00000522556 HIST1H1TP22492 207 aaPredicted RBP16.74■□□□□ 0.27
CLK4-211ENST00000522556 ATP5F1P24539 256 aaPredicted RBP16.74■□□□□ 0.27
CLK4-211ENST00000522556 HNRNPH2P55795 449 aaKnown RBP16.74■□□□□ 0.27
CLK4-211ENST00000522556 SLC26A5P58743 744 aa16.74■□□□□ 0.27
CLK4-211ENST00000522556 ID2Q02363 134 aa16.74■□□□□ 0.27
CLK4-211ENST00000522556 CLCQ05315 142 aa16.74■□□□□ 0.27
CLK4-211ENST00000522556 MFAP5Q13361 173 aa16.74■□□□□ 0.27
CLK4-211ENST00000522556 IRAK1BP1Q5VVH5 260 aa16.74■□□□□ 0.27
CLK4-211ENST00000522556 PLAG1Q6DJT9 500 aa16.74■□□□□ 0.27
CLK4-211ENST00000522556 ISLR2Q6UXK2 745 aa16.74■□□□□ 0.27
CLK4-211ENST00000522556 UCN3Q969E3 161 aa16.74■□□□□ 0.27
CLK4-211ENST00000522556 TBCDQ9BTW9 1192 aa16.74■□□□□ 0.27
CLK4-211ENST00000522556 CLK4Q9HAZ1 481 aaKnown RBP16.74■□□□□ 0.27
CLK4-211ENST00000522556 PRTFDC1Q9NRG1 225 aa16.74■□□□□ 0.27
CLK4-211ENST00000522556 FBXW2Q9UKT8 454 aa16.74■□□□□ 0.27
CLK4-211ENST00000522556 TSC22D4Q9Y3Q8 395 aa16.74■□□□□ 0.27
CLK4-211ENST00000522556 PLIN3O60664 434 aa16.73■□□□□ 0.27
CLK4-211ENST00000522556 CDH16O75309 829 aa16.73■□□□□ 0.27
CLK4-211ENST00000522556 KRT4P19013 534 aa16.73■□□□□ 0.27
CLK4-211ENST00000522556 SERPINB1P30740 379 aa16.73■□□□□ 0.27
CLK4-211ENST00000522556 BSGP35613 385 aa16.73■□□□□ 0.27
CLK4-211ENST00000522556 RAP1GDS1P52306 607 aa16.73■□□□□ 0.27
CLK4-211ENST00000522556 ACTN3Q08043 901 aaPredicted RBP16.73■□□□□ 0.27
CLK4-211ENST00000522556 RASA2Q15283 850 aa16.73■□□□□ 0.27
CLK4-211ENST00000522556 GGTA1PQ4G0N0 100 aa16.73■□□□□ 0.27
CLK4-211ENST00000522556 TMEM35AQ53FP2 167 aa16.73■□□□□ 0.27
CLK4-211ENST00000522556 OR4C11Q6IEV9 310 aa16.73■□□□□ 0.27
CLK4-211ENST00000522556 EMBQ6PCB8 327 aa16.73■□□□□ 0.27
CLK4-211ENST00000522556 ZYG11AQ6WRX3 759 aa16.73■□□□□ 0.27
CLK4-211ENST00000522556 Q6ZS92 163 aa16.73■□□□□ 0.27
CLK4-211ENST00000522556 CHSY3Q70JA7 882 aa16.73■□□□□ 0.27
CLK4-211ENST00000522556 MILR1Q7Z6M3 343 aa16.73■□□□□ 0.27
CLK4-211ENST00000522556 PNPLA2Q96AD5 504 aa16.73■□□□□ 0.27
CLK4-211ENST00000522556 CNDP1Q96KN2 507 aa16.73■□□□□ 0.27
CLK4-211ENST00000522556 LPAR4Q99677 370 aa16.73■□□□□ 0.27
CLK4-211ENST00000522556 GSTO2Q9H4Y5 243 aa16.73■□□□□ 0.27
CLK4-211ENST00000522556 HELZ2Q9BYK8 2649 aaKnown RBP16.73■□□□□ 0.27
CLK4-211ENST00000522556 BAHCC1Q9P281 2608 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 CNTRLQ7Z7A1 2325 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 A0A088AWK7 358 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 ARHGAP10A1A4S6 786 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 TTLL8A6PVC2 850 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 WASHC1A8K0Z3 465 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 LDB3O75112 727 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 CREB1P16220 341 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 TAC1P20366 129 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 ZNF10P21506 573 aaPredicted RBP16.72■□□□□ 0.27
CLK4-211ENST00000522556 HTR6P50406 440 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 PRKAA2P54646 552 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 SLC18A2Q05940 514 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 TGM3Q08188 693 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 SLC13A2Q13183 592 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 AP5B1Q2VPB7 878 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 CRB2Q5IJ48 1285 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 FRG2Q64ET8 278 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 C18orf63Q68DL7 685 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 RIPOR1Q6ZS17 1223 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 LCA5Q86VQ0 697 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 ZADH2Q8N4Q0 377 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 EFCAB3Q8N7B9 438 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 CDYL2Q8N8U2 506 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 NFAM1Q8NET5 270 aaPredicted RBP16.72■□□□□ 0.27
CLK4-211ENST00000522556 SREK1Q8WXA9 508 aaKnown RBP16.72■□□□□ 0.27
CLK4-211ENST00000522556 L3HYPDHQ96EM0 354 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 C19orf60Q96EN9 201 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 FRG2BQ96QU4 278 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 KCNA7Q96RP8 456 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 PPCSQ9HAB8 311 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 TNFRSF12AQ9NP84 129 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 PNO1Q9NRX1 252 aaKnown RBP16.72■□□□□ 0.27
CLK4-211ENST00000522556 DCDC2Q9UHG0 476 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 ZNF223Q9UK11 482 aaPredicted RBP16.72■□□□□ 0.27
CLK4-211ENST00000522556 B3GNT3Q9Y2A9 372 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 NTNG1Q9Y2I2 539 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 ATG4BQ9Y4P1 393 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 MMACHCQ9Y4U1 282 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 TENM4Q6N022 2769 aa16.72■□□□□ 0.27
CLK4-211ENST00000522556 A0A0A6YYD5 115 aa16.71■□□□□ 0.27
CLK4-211ENST00000522556 SAGE2PA6NJ88 616 aa16.71■□□□□ 0.27
CLK4-211ENST00000522556 A8MUI8 341 aa16.71■□□□□ 0.27
CLK4-211ENST00000522556 UBFD1O14562 309 aaKnown RBP16.71■□□□□ 0.27
CLK4-211ENST00000522556 OTCP00480 354 aa16.71■□□□□ 0.27
CLK4-211ENST00000522556 PDYNP01213 254 aa16.71■□□□□ 0.27
CLK4-211ENST00000522556 CHN1P15882 459 aa16.71■□□□□ 0.27
CLK4-211ENST00000522556 IMPDH1P20839 514 aa16.71■□□□□ 0.27
CLK4-211ENST00000522556 HPDP32754 393 aaPredicted RBP16.71■□□□□ 0.27
CLK4-211ENST00000522556 CRHR1P34998 444 aa16.71■□□□□ 0.27
CLK4-211ENST00000522556 FOXK1P85037 733 aa16.71■□□□□ 0.27
CLK4-211ENST00000522556 SLAMF1Q13291 335 aa16.71■□□□□ 0.27
CLK4-211ENST00000522556 TTC19Q6DKK2 380 aaPredicted RBP16.71■□□□□ 0.27
CLK4-211ENST00000522556 TRABD2AQ86V40 505 aa16.71■□□□□ 0.27
CLK4-211ENST00000522556 CRLF3Q8IUI8 442 aa16.71■□□□□ 0.27
CLK4-211ENST00000522556 OR4N5Q8IXE1 308 aa16.71■□□□□ 0.27
CLK4-211ENST00000522556 PPP4R1Q8TF05 950 aa16.71■□□□□ 0.27
CLK4-211ENST00000522556 MIB2Q96AX9 1013 aa16.71■□□□□ 0.27
CLK4-211ENST00000522556 RGMAQ96B86 450 aa16.71■□□□□ 0.27
CLK4-211ENST00000522556 ANKRD9Q96BM1 317 aaPredicted RBP16.71■□□□□ 0.27
CLK4-211ENST00000522556 REPS1Q96D71 796 aa16.71■□□□□ 0.27
CLK4-211ENST00000522556 MRPL1Q9BYD6 325 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms