RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 NCLNQ969V3 563 aa19.32■□□□□ 0.68
SDCBP-209ENST00000522243 CCDC120Q96HB5 630 aa19.32■□□□□ 0.68
SDCBP-209ENST00000522243 MS4A8Q9BY19 250 aa19.32■□□□□ 0.68
SDCBP-209ENST00000522243 OPTCQ9UBM4 332 aa19.32■□□□□ 0.68
SDCBP-209ENST00000522243 MRPS33Q9Y291 106 aaKnown RBP19.32■□□□□ 0.68
SDCBP-209ENST00000522243 ACOT9Q9Y305 439 aa19.32■□□□□ 0.68
SDCBP-209ENST00000522243 CYR61O00622 381 aa19.31■□□□□ 0.68
SDCBP-209ENST00000522243 TGFB1P01137 390 aa19.31■□□□□ 0.68
SDCBP-209ENST00000522243 IFNA16P05015 189 aa19.31■□□□□ 0.68
SDCBP-209ENST00000522243 HLCSP50747 726 aa19.31■□□□□ 0.68
SDCBP-209ENST00000522243 TBCCQ15814 346 aa19.31■□□□□ 0.68
SDCBP-209ENST00000522243 C3AR1Q16581 482 aa19.31■□□□□ 0.68
SDCBP-209ENST00000522243 UBAP2Q5T6F2 1119 aaKnown RBP19.31■□□□□ 0.68
SDCBP-209ENST00000522243 ZNF793Q6ZN11 406 aa19.31■□□□□ 0.68
SDCBP-209ENST00000522243 ZNF595Q8IYB9 648 aa19.31■□□□□ 0.68
SDCBP-209ENST00000522243 ADAMTS18Q8TE60 1221 aa19.31■□□□□ 0.68
SDCBP-209ENST00000522243 VMP1Q96GC9 406 aa19.31■□□□□ 0.68
SDCBP-209ENST00000522243 LIN28AQ9H9Z2 209 aaKnown RBP19.31■□□□□ 0.68
SDCBP-209ENST00000522243 ZDHHC18Q9NUE0 388 aa19.31■□□□□ 0.68
SDCBP-209ENST00000522243 SUCOQ9UBS9 1254 aaKnown RBP19.31■□□□□ 0.68
SDCBP-209ENST00000522243 DOPEY1Q5JWR5 2465 aa19.31■□□□□ 0.68
SDCBP-209ENST00000522243 PRSS44E7EML9 344 aa19.3■□□□□ 0.68
SDCBP-209ENST00000522243 K7EPI3 171 aa19.3■□□□□ 0.68
SDCBP-209ENST00000522243 SAP18O00422 153 aaKnown RBP19.3■□□□□ 0.68
SDCBP-209ENST00000522243 PRKNO60260 465 aaPredicted RBP19.3■□□□□ 0.68
SDCBP-209ENST00000522243 NME2P1O60361 137 aa19.3■□□□□ 0.68
SDCBP-209ENST00000522243 SLC19A2O60779 497 aa19.3■□□□□ 0.68
SDCBP-209ENST00000522243 URI1O94763 535 aaPredicted RBP19.3■□□□□ 0.68
SDCBP-209ENST00000522243 MLYCDO95822 493 aa19.3■□□□□ 0.68
SDCBP-209ENST00000522243 C2P06681 752 aa19.3■□□□□ 0.68
SDCBP-209ENST00000522243 NME2P22392 152 aa19.3■□□□□ 0.68
SDCBP-209ENST00000522243 TRHRP34981 398 aaPredicted RBP19.3■□□□□ 0.68
SDCBP-209ENST00000522243 KRTCAP3Q53RY4 240 aa19.3■□□□□ 0.68
SDCBP-209ENST00000522243 RNFT1Q5M7Z0 435 aa19.3■□□□□ 0.68
SDCBP-209ENST00000522243 MED27Q6P2C8 311 aa19.3■□□□□ 0.68
SDCBP-209ENST00000522243 C16orf47Q6ZP98 133 aaPredicted RBP19.3■□□□□ 0.68
SDCBP-209ENST00000522243 CENPLQ8N0S6 344 aaPredicted RBP19.3■□□□□ 0.68
SDCBP-209ENST00000522243 RNF175Q8N4F7 328 aa19.3■□□□□ 0.68
SDCBP-209ENST00000522243 ITLN2Q8WWU7 325 aaPredicted RBP19.3■□□□□ 0.68
SDCBP-209ENST00000522243 TMEM125Q96AQ2 219 aa19.3■□□□□ 0.68
SDCBP-209ENST00000522243 C16orf45Q96MC5 204 aaPredicted RBP19.3■□□□□ 0.68
SDCBP-209ENST00000522243 MAPKAP1Q9BPZ7 522 aa19.3■□□□□ 0.68
SDCBP-209ENST00000522243 TRIM45Q9H8W5 580 aaPredicted RBP19.3■□□□□ 0.68
SDCBP-209ENST00000522243 ADAP2Q9NPF8 381 aa19.3■□□□□ 0.68
SDCBP-209ENST00000522243 KCMF1Q9P0J7 381 aa19.3■□□□□ 0.68
SDCBP-209ENST00000522243 TINAGQ9UJW2 476 aa19.3■□□□□ 0.68
SDCBP-209ENST00000522243 NBPF19A0A087WUL8 3843 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 ARHGAP10A1A4S6 786 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 HMX2A2RU54 273 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 ASNA1O43681 348 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 CTNSO60931 367 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 LDB3O75112 727 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 ITGA10O75578 1167 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 MTHFD2P13995 350 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 CASP2P42575 452 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 GPR143P51810 404 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 HSF1Q00613 529 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 DDX39BQ13838 428 aaKnown RBP19.29■□□□□ 0.68
SDCBP-209ENST00000522243 E2F2Q14209 437 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 TERF2Q15554 542 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.29■□□□□ 0.68
SDCBP-209ENST00000522243 SP5Q6BEB4 398 aaPredicted RBP19.29■□□□□ 0.68
SDCBP-209ENST00000522243 MRGPRGQ86SM5 289 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 SIAH3Q8IW03 269 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 LAS2Q8IYD9 372 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 ARMC10Q8N2F6 343 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 TMEM156Q8N614 296 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 TEX9Q8N6V9 391 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 ACOT4Q8N9L9 421 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 OR7G3Q8NG95 312 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 UBTD2Q8WUN7 234 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 MAGED4Q96JG8 741 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 KCNC2Q96PR1 638 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 CCDC77Q9BR77 488 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 SORBS1Q9BX66 1292 aaKnown RBP19.29■□□□□ 0.68
SDCBP-209ENST00000522243 ALOXE3Q9BYJ1 711 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 SNX15Q9NRS6 342 aa19.29■□□□□ 0.68
SDCBP-209ENST00000522243 PPIEQ9UNP9 301 aaKnown RBP19.29■□□□□ 0.68
SDCBP-209ENST00000522243 A0A087X1B8 175 aa19.28■□□□□ 0.68
SDCBP-209ENST00000522243 LRRC14BA6NHZ5 514 aa19.28■□□□□ 0.68
SDCBP-209ENST00000522243 CDK2AP1O14519 115 aa19.28■□□□□ 0.68
SDCBP-209ENST00000522243 EPB42P16452 691 aa19.28■□□□□ 0.68
SDCBP-209ENST00000522243 ATP5A1P25705 553 aaKnown RBP19.28■□□□□ 0.68
SDCBP-209ENST00000522243 RFC3P40938 356 aa19.28■□□□□ 0.68
SDCBP-209ENST00000522243 MEOX1P50221 254 aa19.28■□□□□ 0.68
SDCBP-209ENST00000522243 CASP6P55212 293 aa19.28■□□□□ 0.68
SDCBP-209ENST00000522243 ID2Q02363 134 aa19.28■□□□□ 0.68
SDCBP-209ENST00000522243 STX4Q12846 297 aa19.28■□□□□ 0.68
SDCBP-209ENST00000522243 RCN2Q14257 317 aa19.28■□□□□ 0.68
SDCBP-209ENST00000522243 MYLK4Q86YV6 388 aaPredicted RBP19.28■□□□□ 0.68
SDCBP-209ENST00000522243 SPPL2CQ8IUH8 684 aa19.28■□□□□ 0.68
SDCBP-209ENST00000522243 SRFBP1Q8NEF9 429 aaKnown RBP19.28■□□□□ 0.68
SDCBP-209ENST00000522243 UBE2E3Q969T4 207 aa19.28■□□□□ 0.68
SDCBP-209ENST00000522243 TBCDQ9BTW9 1192 aa19.28■□□□□ 0.68
SDCBP-209ENST00000522243 OR51B5Q9H339 312 aa19.28■□□□□ 0.68
SDCBP-209ENST00000522243 NINJ2Q9NZG7 142 aa19.28■□□□□ 0.68
SDCBP-209ENST00000522243 ANGPTL3Q9Y5C1 460 aa19.28■□□□□ 0.68
SDCBP-209ENST00000522243 A0A096LPK6 155 aa19.27■□□□□ 0.68
SDCBP-209ENST00000522243 ZFAND5O76080 213 aa19.27■□□□□ 0.68
SDCBP-209ENST00000522243 ESRRAP11474 423 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms