RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 LIM2P55344 173 aa12.66□□□□□ -0.38
CLK4-210ENST00000522136 PRSS53Q2L4Q9 553 aa12.66□□□□□ -0.38
CLK4-210ENST00000522136 GPR180Q86V85 440 aa12.66□□□□□ -0.38
CLK4-210ENST00000522136 RIMKLAQ8IXN7 391 aa12.66□□□□□ -0.38
CLK4-210ENST00000522136 CA13Q8N1Q1 262 aa12.66□□□□□ -0.38
CLK4-210ENST00000522136 OR7A2PQ8NGA2 310 aa12.66□□□□□ -0.38
CLK4-210ENST00000522136 SLC7A5P2Q9GIP4 190 aa12.66□□□□□ -0.38
CLK4-210ENST00000522136 ACTR5Q9H9F9 607 aaPredicted RBP12.66□□□□□ -0.38
CLK4-210ENST00000522136 DLL3Q9NYJ7 618 aa12.66□□□□□ -0.38
CLK4-210ENST00000522136 C5AR2Q9P296 337 aa12.66□□□□□ -0.38
CLK4-210ENST00000522136 DAPP1Q9UN19 280 aa12.66□□□□□ -0.38
CLK4-210ENST00000522136 GABRR3A8MPY1 467 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 B4E171 279 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 NR5A2O00482 541 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 DSCR3O14972 297 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 CHST10O43529 356 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 UBOX5O94941 541 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 ZNF28P17035 718 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 ITGAXP20702 1163 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 JAK1P23458 1154 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 TSPAN7P41732 249 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 ASMTP46597 345 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 ALDH9A1P49189 494 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 POLR2JP52435 117 aaKnown RBP12.65□□□□□ -0.38
CLK4-210ENST00000522136 ARSFP54793 590 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 KLC1Q07866 573 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 UGT8Q16880 541 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 C3orf38Q5JPI3 329 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 NDUFAF5Q5TEU4 345 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 FAM180BQ6P0A1 224 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 CSF3RQ99062 836 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 TXLNGQ9NUQ3 528 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 B3GALT1Q9Y5Z6 326 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 NUP214P35658 2090 aaPredicted RBP12.65□□□□□ -0.38
CLK4-210ENST00000522136 CCDC88CQ9P219 2028 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 CCDC187A0A096LP49 1063 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 A0A1B0GX78 115 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 PGRMC2O15173 223 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 PROM1O43490 865 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 RRP9O43818 475 aaKnown RBP12.65□□□□□ -0.38
CLK4-210ENST00000522136 CBX6O95503 412 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 AIFM1O95831 613 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 JMJD7P0C870 316 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 PIM1P11309 404 aaPredicted RBP12.65□□□□□ -0.38
CLK4-210ENST00000522136 PRPS1L1P21108 318 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 AVPR1BP47901 424 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 TRA2BP62995 288 aaKnown RBP12.65□□□□□ -0.38
CLK4-210ENST00000522136 PHC1P78364 1004 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 SHC2P98077 582 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 PGS1Q32NB8 556 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 FAM174BQ3ZCQ3 159 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 VPS26BQ4G0F5 336 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 ZNF385BQ569K4 471 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 SPANXN4Q5MJ08 99 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 RHBDD2Q6NTF9 364 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 BLOC1S3Q6QNY0 202 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 SNX32Q86XE0 403 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 FAM47BQ8NA70 645 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 VPS33AQ96AX1 596 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 CLIP3Q96DZ5 547 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 RBCK1Q9BYM8 510 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 CLMPQ9H6B4 373 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 REEP4Q9H6H4 257 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 LYARQ9NX58 379 aaKnown RBP12.65□□□□□ -0.38
CLK4-210ENST00000522136 SRPK3Q9UPE1 567 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 SATB2Q9UPW6 733 aa12.65□□□□□ -0.38
CLK4-210ENST00000522136 FAM234BA2RU67 622 aa12.64□□□□□ -0.39
CLK4-210ENST00000522136 EBAG9O00559 213 aa12.64□□□□□ -0.39
CLK4-210ENST00000522136 PLD2O14939 933 aa12.64□□□□□ -0.39
CLK4-210ENST00000522136 SCAMP2O15127 329 aaKnown RBP12.64□□□□□ -0.39
CLK4-210ENST00000522136 FURINP09958 794 aa12.64□□□□□ -0.39
CLK4-210ENST00000522136 COX7A2P14406 83 aa12.64□□□□□ -0.39
CLK4-210ENST00000522136 CAPN3P20807 821 aa12.64□□□□□ -0.39
CLK4-210ENST00000522136 EFNA1P20827 205 aaPredicted RBP12.64□□□□□ -0.39
CLK4-210ENST00000522136 CPN2P22792 545 aa12.64□□□□□ -0.39
CLK4-210ENST00000522136 ADSLP30566 484 aaPredicted RBP12.64□□□□□ -0.39
CLK4-210ENST00000522136 CPA2P48052 419 aa12.64□□□□□ -0.39
CLK4-210ENST00000522136 HNRNPFP52597 415 aaKnown RBP12.64□□□□□ -0.39
CLK4-210ENST00000522136 ERV3-1Q14264 604 aa12.64□□□□□ -0.39
CLK4-210ENST00000522136 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.64□□□□□ -0.39
CLK4-210ENST00000522136 YOD1Q5VVQ6 348 aaPredicted RBP12.64□□□□□ -0.39
CLK4-210ENST00000522136 FAM91A1Q658Y4 838 aa12.64□□□□□ -0.39
CLK4-210ENST00000522136 BPHLQ86WA6 291 aaPredicted RBP12.64□□□□□ -0.39
CLK4-210ENST00000522136 TMPRSS12Q86WS5 348 aa12.64□□□□□ -0.39
CLK4-210ENST00000522136 TICAM1Q8IUC6 712 aa12.64□□□□□ -0.39
CLK4-210ENST00000522136 TMEM52Q8NDY8 209 aa12.64□□□□□ -0.39
CLK4-210ENST00000522136 PEX11GQ96HA9 241 aa12.64□□□□□ -0.39
CLK4-210ENST00000522136 ZBTB18Q99592 522 aa12.64□□□□□ -0.39
CLK4-210ENST00000522136 YIPF2Q9BWQ6 316 aa12.64□□□□□ -0.39
CLK4-210ENST00000522136 LYRM4Q9HD34 91 aa12.64□□□□□ -0.39
CLK4-210ENST00000522136 SLC52A3Q9NQ40 469 aa12.64□□□□□ -0.39
CLK4-210ENST00000522136 SH3BP4Q9P0V3 963 aa12.64□□□□□ -0.39
CLK4-210ENST00000522136 PCDHB3Q9Y5E6 796 aa12.64□□□□□ -0.39
CLK4-210ENST00000522136 CFAP54Q96N23 3096 aa12.64□□□□□ -0.39
CLK4-210ENST00000522136 H0YIG0 161 aa12.63□□□□□ -0.39
CLK4-210ENST00000522136 CYR61O00622 381 aa12.63□□□□□ -0.39
CLK4-210ENST00000522136 SLC22A2O15244 555 aa12.63□□□□□ -0.39
CLK4-210ENST00000522136 KIAA0754O94854 1291 aa12.63□□□□□ -0.39
CLK4-210ENST00000522136 T-ENOLP0DO92 83 aa12.63□□□□□ -0.39
CLK4-210ENST00000522136 LAMP1P11279 417 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms