RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 OAS1P00973 400 aaKnown RBP2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 MMP1P03956 469 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 GYPCP04921 128 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 TOP1P11387 765 aaKnown RBP2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 IDO1P14902 403 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 ZNF26P17031 533 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 ACAT1P24752 427 aaKnown RBP2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 ADORA1P30542 326 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 BMXP51813 675 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 SNRPD1P62314 119 aaKnown RBP2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 PLOD1Q02809 727 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 SULT2A1Q06520 285 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 ILF2Q12905 390 aaKnown RBP2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 IFT88Q13099 833 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 KARSQ15046 597 aaKnown RBP2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 UGCGQ16739 394 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 PARP10Q53GL7 1025 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 XKR3Q5GH77 459 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 SPECC1Q5M775 1068 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 SPOUT1Q5T280 376 aaKnown RBP2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 UGT3A1Q6NUS8 523 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 ENPP7Q6UWV6 458 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 PPP1R21Q6ZMI0 780 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 KIF6Q6ZMV9 814 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 TOM1L2Q6ZVM7 507 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 ASRGL1Q7L266 308 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 RAB42Q8N4Z0 105 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 OR10G8Q8NGN5 311 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 C9orf43Q8TAL5 461 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 AGAP11Q8TF27 550 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 WBP2Q969T9 261 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 CENPTQ96BT3 561 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 MAP3K3Q99759 626 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 SLC2A11Q9BYW1 496 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 SHARPINQ9H0F6 387 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 WDR13Q9H1Z4 485 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 MMADHCQ9H3L0 296 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 FZD8Q9H461 694 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 ST6GALNAC4Q9H4F1 302 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 RNF41Q9H4P4 317 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 ATP13A3Q9H7F0 1226 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 DNAJC4Q9NNZ3 241 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 PANK4Q9NVE7 773 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 TMOD3Q9NYL9 352 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 ADAM22Q9P0K1 906 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 POLLQ9UGP5 575 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 TMCO1Q9UM00 188 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 SNX7Q9UNH6 387 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 CHKBQ9Y259 395 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 L3MBTL1Q9Y468 752 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 ZNF532Q9HCE3 1301 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 SYNRGQ9UMZ2 1314 aa2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 COL5A2P05997 1499 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P41-201ENST00000520234 UBR2Q8IWV8 1755 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 C5P01031 1676 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 GMNCA6NCL1 334 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 CFAP73A6NFT4 308 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 E7ENQ6 273 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 F8VZ95 297 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 RANBP6O60518 1105 aaKnown RBP2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 TBCAO75347 108 aaKnown RBP2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 ATP6V1G1O75348 118 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 KIAA0754O94854 1291 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 LUC7L3O95232 432 aaKnown RBP2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 DEXIO95424 95 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 CALM1P0DP23 149 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 CALM2P0DP24 149 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 CALM3P0DP25 149 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 HSPA9P38646 679 aaKnown RBP2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 NAGLUP54802 743 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 ERVK11-1P61568 191 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 NCALDP61601 193 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 MYL7Q01449 175 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 MZT1Q08AG7 82 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 TRAP1Q12931 704 aaKnown RBP2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 TRIM29Q14134 588 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 SQLEQ14534 574 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 E2F5Q15329 346 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 BCL2A1Q16548 175 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 CLPPQ16740 277 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 ZFP69Q49AA0 526 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 SBK1Q52WX2 424 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 TNFAIP8L3Q5GJ75 292 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 SLC25A53Q5H9E4 307 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 ANKRD20A2Q5SQ80 823 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 ADAMTSL4-AS1Q5T5F5 129 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 ANKRD20A1Q5TYW2 823 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 ANKRD20A3Q5VUR7 823 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 WDR59Q6PJI9 974 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 MOXD1Q6UVY6 613 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 OLFM4Q6UX06 510 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 C3orf62Q6ZUJ4 267 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 CCDC121Q6ZUS5 278 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 ABI3BPQ7Z7G0 1075 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 ERICH1Q86X53 443 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 TBC1D10CQ8IV04 446 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 LRRC43Q8N309 656 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 TEX9Q8N6V9 391 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 CCDC148Q8NFR7 591 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 SETD6Q8TBK2 473 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms