RNA–Protein interactions for RNA: ENST00000519599.1

IGKV3D-25-201, Transcript of immunoglobulin kappa variable 3D-25 (pseudogene), humanhuman

BASIC

Gene IGKV3D-25, Length 235 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-25-201ENST00000519599 LIN28AQ9H9Z2 209 aaKnown RBP5.72□□□□□ -1.49
IGKV3D-25-201ENST00000519599 SH2D2AQ9NP31 389 aa5.72□□□□□ -1.49
IGKV3D-25-201ENST00000519599 PRTFDC1Q9NRG1 225 aa5.72□□□□□ -1.49
IGKV3D-25-201ENST00000519599 DNAJC11Q9NVH1 559 aa5.72□□□□□ -1.49
IGKV3D-25-201ENST00000519599 ZNF358Q9NW07 568 aa5.72□□□□□ -1.49
IGKV3D-25-201ENST00000519599 NSMCE4AQ9NXX6 385 aa5.72□□□□□ -1.49
IGKV3D-25-201ENST00000519599 LRFN1Q9P244 771 aa5.72□□□□□ -1.49
IGKV3D-25-201ENST00000519599 SEC14L3Q9UDX4 400 aa5.72□□□□□ -1.49
IGKV3D-25-201ENST00000519599 DMGDHQ9UI17 866 aaKnown RBP5.72□□□□□ -1.49
IGKV3D-25-201ENST00000519599 ENTPD4Q9Y227 616 aa5.72□□□□□ -1.49
IGKV3D-25-201ENST00000519599 DCHS2Q6V1P9 2916 aa5.72□□□□□ -1.49
IGKV3D-25-201ENST00000519599 ABCA12Q86UK0 2595 aa5.72□□□□□ -1.49
IGKV3D-25-201ENST00000519599 MED13LQ71F56 2210 aa5.72□□□□□ -1.49
IGKV3D-25-201ENST00000519599 LRBAP50851 2863 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 TRBV11-1A0A0K0K1C0 115 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 A0A1B0GUH1 482 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 PLPP1O14494 284 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 CDK2AP1O14519 115 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 FGF17O60258 216 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 SLC19A2O60779 497 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 KERAO60938 352 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 LDB3O75112 727 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 ITGA10O75578 1167 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 STK16O75716 305 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 SLC25A12O75746 678 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 MYO1DO94832 1006 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 NADKO95544 446 aaPredicted RBP5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 CRYABP02511 175 aaKnown RBP5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 IGKV3-11P04433 115 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 C2P06681 752 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 GSTA2P09210 222 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 JAK1P23458 1154 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 ATP5A1P25705 553 aaKnown RBP5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 GSTM2P28161 218 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 GCAP28676 217 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 PTGER1P34995 402 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 RFC3P40938 356 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 HLCSP50747 726 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 PLA2G16P53816 162 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 HNRNPH2P55795 449 aaKnown RBP5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 HSD17B7P56937 341 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 STXBP1P61764 594 aaKnown RBP5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 AP2B1P63010 937 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 CHIT1Q13231 466 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 ART3Q13508 389 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 ELOAQ14241 798 aaKnown RBP5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 NAA30Q147X3 362 aaPredicted RBP5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 SETDB1Q15047 1291 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 PDK4Q16654 411 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 TECRLQ5HYJ1 363 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 NIPAL1Q6NVV3 410 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 LRRC70Q7Z2Q7 622 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 CLNKQ7Z7G1 428 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 DOLPP1Q86YN1 238 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 SPPL2CQ8IUH8 684 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 RELL1Q8IUW5 271 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 SULF2Q8IWU5 870 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 ZNF295-AS1Q8N0V1 137 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 TCAIMQ8N3R3 496 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 RPRMLQ8N4K4 120 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 SLC5A8Q8N695 610 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 PPM1NQ8N819 430 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 ZFP62Q8NB50 900 aaPredicted RBP5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 BBOF1Q8ND07 529 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 OR7G3Q8NG95 312 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 WDR20Q8TBZ3 569 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 KCTD4Q8WVF5 259 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 EXT2Q93063 718 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 NTNG2Q96CW9 530 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 PTCD3Q96EY7 689 aaKnown RBP5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 SERINC2Q96SA4 455 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 TREX2Q9BQ50 279 aaPredicted RBP5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 UTP23Q9BRU9 249 aaKnown RBP5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 TRIM8Q9BZR9 551 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 REXO4Q9GZR2 422 aaKnown RBP5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 PROK2Q9HC23 129 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 ZBTB26Q9HCK0 441 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 ADAP2Q9NPF8 381 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 WWOXQ9NZC7 414 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 NINJ2Q9NZG7 142 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 NUDT4Q9NZJ9 180 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 VTI1BQ9UEU0 232 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 TEKT2Q9UIF3 430 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 MEMO1Q9Y316 297 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 TSC22D4Q9Y3Q8 395 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 LIPGQ9Y5X9 500 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 CREBBPQ92793 2442 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 MPDZO75970 2070 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 MYO9AB2RTY4 2548 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 ADGRG4Q8IZF6 3080 aa5.71□□□□□ -1.5
IGKV3D-25-201ENST00000519599 A0A0A6YYD5 115 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 TRGV8A0A0C4DH27 118 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 NPIPA5E9PKD4 350 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 K7EPI3 171 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 SAP18O00422 153 aaKnown RBP5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 CCL21O00585 134 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 OR7A17O14581 309 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 ASNA1O43681 348 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 B3GALT2O43825 422 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 TMPRSS11DO60235 418 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms