RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 CDH16O75309 829 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 SEMA3DO95025 777 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 SLU7O95391 586 aaKnown RBP11.98□□□□□ -0.49
CLCN3-210ENST00000515420 TGFB1P01137 390 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 UQCRHP07919 91 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 CELA2AP08217 269 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 MAOAP21397 527 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 SSR2P43308 183 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 RAP1GDS1P52306 607 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 TAS2R50P59544 299 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 NAA20P61599 178 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 HERVK_113P63132 956 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 ARG2P78540 354 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 ZRSR2Q15696 482 aaKnown RBP11.98□□□□□ -0.49
CLCN3-210ENST00000515420 INAQ16352 499 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 CPSF6Q16630 551 aaKnown RBP eCLIP11.98□□□□□ -0.49
CLCN3-210ENST00000515420 COLEC12Q5KU26 742 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 OR4C11Q6IEV9 310 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 RPUSD3Q6P087 351 aaKnown RBP11.98□□□□□ -0.49
CLCN3-210ENST00000515420 WDR93Q6P2C0 686 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 LINC00696Q6ZRV3 163 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 CUZD1Q86UP6 607 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 ZCCHC7Q8N3Z6 543 aaKnown RBP11.98□□□□□ -0.49
CLCN3-210ENST00000515420 SLC5A8Q8N695 610 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 OR52B6Q8NGF0 335 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 ELP5Q8TE02 316 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 ZNF354BQ96LW1 612 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 MTERF1Q99551 399 aaKnown RBP11.98□□□□□ -0.49
CLCN3-210ENST00000515420 BARD1Q99728 777 aaKnown RBP11.98□□□□□ -0.49
CLCN3-210ENST00000515420 ERVK-6Q9BXR3 956 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 SLC29A3Q9BZD2 475 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 NECTIN3Q9NQS3 549 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 PRTFDC1Q9NRG1 225 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 TMEM216Q9P0N5 145 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 TBK1Q9UHD2 729 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 PPIEQ9UNP9 301 aaKnown RBP11.98□□□□□ -0.49
CLCN3-210ENST00000515420 STK38LQ9Y2H1 464 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 RNF11Q9Y3C5 154 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 CLDN16Q9Y5I7 305 aa11.98□□□□□ -0.49
CLCN3-210ENST00000515420 TRAV17A0A0B4J275 112 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 ESPNB1AK53 854 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 CTNSO60931 367 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 GLRA3O75311 464 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 VPS4BO75351 444 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 SHBGP04278 402 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 NUDT17P0C025 328 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 PYGBP11216 843 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 ATP5F1P24539 256 aaPredicted RBP11.97□□□□□ -0.49
CLCN3-210ENST00000515420 ARL1P40616 181 aaPredicted RBP11.97□□□□□ -0.49
CLCN3-210ENST00000515420 TNFSF10P50591 281 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 RPS13P62277 151 aaKnown RBP11.97□□□□□ -0.49
CLCN3-210ENST00000515420 VSNL1P62760 191 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 BIKQ13323 160 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 DDX39BQ13838 428 aaKnown RBP11.97□□□□□ -0.49
CLCN3-210ENST00000515420 IGFBP7Q16270 282 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 MEP1AQ16819 746 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 ACER2Q5QJU3 275 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 FRG2Q64ET8 278 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 EMBQ6PCB8 327 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 SH2D5Q6ZV89 423 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 ARMC10Q8N2F6 343 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 RIBC1Q8N443 379 aaPredicted RBP11.97□□□□□ -0.49
CLCN3-210ENST00000515420 FAM47BQ8NA70 645 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 NFAM1Q8NET5 270 aaPredicted RBP11.97□□□□□ -0.49
CLCN3-210ENST00000515420 SNRNP40Q96DI7 357 aaKnown RBP11.97□□□□□ -0.49
CLCN3-210ENST00000515420 CCDC126Q96EE4 140 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 CNDP1Q96KN2 507 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 NSUN5Q96P11 429 aaKnown RBP11.97□□□□□ -0.49
CLCN3-210ENST00000515420 FRG2BQ96QU4 278 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 SERPINI1Q99574 410 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 MAPKAP1Q9BPZ7 522 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 OR51B5Q9H339 312 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 KCNK13Q9HB14 408 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 PRM3Q9NNZ6 103 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 ADAP2Q9NPF8 381 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 SEMA4BQ9NPR2 832 aaPredicted RBP11.97□□□□□ -0.49
CLCN3-210ENST00000515420 LYARQ9NX58 379 aaKnown RBP11.97□□□□□ -0.49
CLCN3-210ENST00000515420 STMN3Q9NZ72 180 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 ABI3Q9P2A4 366 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 PHF11Q9UIL8 331 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 VPS4AQ9UN37 437 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 PLAAQ9Y263 795 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 CSAG2Q9Y5P2 127 aa11.97□□□□□ -0.49
CLCN3-210ENST00000515420 OR5H15A6NDH6 313 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 PYCARD-AS1I3L0S3 204 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 RTCAO00442 366 aaKnown RBP11.96□□□□□ -0.49
CLCN3-210ENST00000515420 PLPP1O14494 284 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 DLX3O60479 287 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 WDPCPO95876 746 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 IMPDH1P20839 514 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 PPP2R1BP30154 601 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 HSD17B3P37058 310 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 ZNF33BQ06732 778 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 IFT88Q13099 833 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 SLC13A2Q13183 592 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 SERTAD2Q14140 314 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 ELAVL1Q15717 326 aaKnown RBP11.96□□□□□ -0.49
CLCN3-210ENST00000515420 CCDC153Q494R4 210 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 ZNF678Q5SXM1 525 aa11.96□□□□□ -0.49
CLCN3-210ENST00000515420 MILR1Q7Z6M3 343 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms