RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 CBSLP0DN79 551 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 ANXA3P12429 323 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 GGT1P19440 569 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 CBSP35520 551 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 MAGEA2P43356 314 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 DEFB103AP81534 67 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 EMX2Q04743 252 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 COL9A2Q14055 689 aaPredicted RBP12.65□□□□□ -0.38
TCOF1-213ENST00000514442 ANKRD54Q6NXT1 300 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 ATP6V1C2Q8NEY4 427 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 ANGPTL6Q8NI99 470 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 BTBD1Q9H0C5 482 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 EXO5Q9H790 373 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 MCUBQ9NWR8 336 aa12.65□□□□□ -0.38
TCOF1-213ENST00000514442 ZNF282Q9UDV7 671 aaPredicted RBP12.65□□□□□ -0.38
TCOF1-213ENST00000514442 CLDN24A6NM45 220 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 PRPS1L1P21108 318 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 NUDT13Q86X67 352 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 FAM46DQ8NEK8 389 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 TMEM125Q96AQ2 219 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 ZBED6CLQ96FA7 236 aaPredicted RBP12.64□□□□□ -0.39
TCOF1-213ENST00000514442 PTGDR2Q9Y5Y4 395 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 MCIDASD6RGH6 385 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 SOCS5O75159 536 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 RFPL3O75679 317 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 PAK4O96013 591 aaPredicted RBP12.64□□□□□ -0.39
TCOF1-213ENST00000514442 CHRM5P08912 532 aaPredicted RBP12.64□□□□□ -0.39
TCOF1-213ENST00000514442 TFPIP10646 304 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 BMP1P13497 986 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 CD1DP15813 335 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 ENGP17813 658 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 CAPN3P20807 821 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 LCN1P31025 176 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 ST3GAL4Q11206 333 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 FAM214AQ32MH5 1076 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 TMEM135Q86UB9 458 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 FRS2Q8WU20 508 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 PTERQ96BW5 349 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 ARMC5Q96C12 935 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 ZCCHC3Q9NUD5 404 aaKnown RBP12.64□□□□□ -0.39
TCOF1-213ENST00000514442 TRPS1Q9UHF7 1281 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 TSPAN6O43657 245 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 EIF2DP41214 584 aaKnown RBP12.64□□□□□ -0.39
TCOF1-213ENST00000514442 HNRNPA0Q13151 305 aaKnown RBP12.64□□□□□ -0.39
TCOF1-213ENST00000514442 ITPRIPL2Q3MIP1 535 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 ENPP6Q6UWR7 440 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 SPAG16Q8N0X2 631 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 WDR83Q9BRX9 315 aaKnown RBP12.64□□□□□ -0.39
TCOF1-213ENST00000514442 SLC35A5Q9BS91 424 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 RAB11FIP5Q9BXF6 653 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 CD244Q9BZW8 370 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 TMEM27Q9HBJ8 222 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 AKIP1Q9NQ31 210 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 FBXO8Q9NRD0 319 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 SPIN1Q9Y657 262 aaPredicted RBP12.64□□□□□ -0.39
TCOF1-213ENST00000514442 ATP6V1G2-DDX39BF2Z307 99 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 CLIC1O00299 241 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 POLR1CO15160 346 aaPredicted RBP12.64□□□□□ -0.39
TCOF1-213ENST00000514442 TM4SF4P48230 202 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 RPS13P62277 151 aaKnown RBP12.64□□□□□ -0.39
TCOF1-213ENST00000514442 RPP38P78345 283 aaKnown RBP12.64□□□□□ -0.39
TCOF1-213ENST00000514442 IFI44LQ53G44 452 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 ZNF805Q5CZA5 627 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 PM20D1Q6GTS8 502 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 TMEM25Q86YD3 366 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 ART5Q96L15 291 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 FZD4Q9ULV1 537 aa12.64□□□□□ -0.39
TCOF1-213ENST00000514442 NHSQ6T4R5 1651 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 DPP6P42658 865 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 SPANXN4Q5MJ08 99 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 IDO2Q6ZQW0 420 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 MAGIXQ9H6Y5 334 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 STRCP1A6NGW2 1772 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 HEPACAM2A8MVW5 462 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 SNAPC5O75971 98 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 M6PRP20645 277 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 BLKP51451 505 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 CD300CQ08708 224 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 IRF5Q13568 498 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 DPY19L1Q2PZI1 675 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 ZNF691Q5VV52 312 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 ZNF783Q6ZMS7 281 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 CASD1Q96PB1 797 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 EDARQ9UNE0 448 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 POLHQ9Y253 713 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 MAST2Q6P0Q8 1798 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 A0A1W2PP55 124 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 POLR2CP19387 275 aaPredicted RBP12.63□□□□□ -0.39
TCOF1-213ENST00000514442 CTSOP43234 321 aaPredicted RBP12.63□□□□□ -0.39
TCOF1-213ENST00000514442 RAB8AP61006 207 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 RAB33AQ14088 237 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 SCARB2Q14108 478 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 ALG11Q2TAA5 492 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 PSD4Q8NDX1 1056 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 HCFC1R1Q9NWW0 138 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 RIMKLBQ9ULI2 386 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 MGAT4AQ9UM21 535 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 L7N2F9 121 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 TGFBR2P37173 567 aa12.63□□□□□ -0.39
TCOF1-213ENST00000514442 RPL35P42766 123 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms