RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 ZCWPW2A0A1B0GU75 182 aa18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 SUSD5O60279 629 aa18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 ZNF354AO60765 605 aaPredicted RBP18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 HIST1H2AGP0C0S8 130 aaPredicted RBP18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 HIST1H2ADP20671 130 aa18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 TACR1P25103 407 aa18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 AHRP35869 848 aa18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 CDK16Q00536 496 aa18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 FOXO1Q12778 655 aa18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 SLC13A2Q13183 592 aa18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 RUNX2Q13950 521 aa18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 RBBP5Q15291 538 aaKnown RBP18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 DUPD1Q68J44 220 aa18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 RTL4Q6ZR62 310 aa18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 CLNKQ7Z7G1 428 aa18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 KRTAP1-3Q8IUG1 177 aa18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 MYO1HQ8N1T3 1032 aa18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 OR56A3Q8NH54 315 aa18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 NUDT8Q8WV74 236 aa18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 SLC5A11Q8WWX8 675 aa18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 HIST1H2AHQ96KK5 128 aa18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 CAPZA3Q96KX2 299 aa18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 HIST1H2AJQ99878 128 aa18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 SH3GL2Q99962 352 aa18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 H2AFJQ9BTM1 129 aa18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 ZNF395Q9H8N7 513 aaPredicted RBP18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 C20orf96Q9NUD7 363 aaPredicted RBP18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 ARL15Q9NXU5 204 aa18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 COMMD10Q9Y6G5 202 aa18.8■□□□□ 0.6
SQSTM1-215ENST00000514093 URADA6NGE7 173 aa18.79■□□□□ 0.6
SQSTM1-215ENST00000514093 HEXAP06865 529 aa18.79■□□□□ 0.6
SQSTM1-215ENST00000514093 PEX19P40855 299 aa18.79■□□□□ 0.6
SQSTM1-215ENST00000514093 VPS41P49754 854 aa18.79■□□□□ 0.6
SQSTM1-215ENST00000514093 RGS4P49798 205 aa18.79■□□□□ 0.6
SQSTM1-215ENST00000514093 HK2P52789 917 aa18.79■□□□□ 0.6
SQSTM1-215ENST00000514093 WNT3P56703 355 aa18.79■□□□□ 0.6
SQSTM1-215ENST00000514093 SP140Q13342 867 aa18.79■□□□□ 0.6
SQSTM1-215ENST00000514093 DAZAP2Q15038 168 aaPredicted RBP18.79■□□□□ 0.6
SQSTM1-215ENST00000514093 ANKRD22Q5VYY1 191 aa18.79■□□□□ 0.6
SQSTM1-215ENST00000514093 PAQR3Q6TCH7 311 aa18.79■□□□□ 0.6
SQSTM1-215ENST00000514093 HSDL2Q6YN16 418 aa18.79■□□□□ 0.6
SQSTM1-215ENST00000514093 ZNF321PQ8N8H1 164 aa18.79■□□□□ 0.6
SQSTM1-215ENST00000514093 NAXEQ8NCW5 288 aa18.79■□□□□ 0.6
SQSTM1-215ENST00000514093 LINGO1Q96FE5 620 aa18.79■□□□□ 0.6
SQSTM1-215ENST00000514093 FBXO5Q9UKT4 447 aa18.79■□□□□ 0.6
SQSTM1-215ENST00000514093 TRGV5A0A0B4J1U4 118 aa18.78■□□□□ 0.6
SQSTM1-215ENST00000514093 HSPB2A8KAH6 182 aa18.78■□□□□ 0.6
SQSTM1-215ENST00000514093 KDM4EB2RXH2 506 aaPredicted RBP18.78■□□□□ 0.6
SQSTM1-215ENST00000514093 FAM47E-STBD1D6RA91 191 aa18.78■□□□□ 0.6
SQSTM1-215ENST00000514093 NRDCO43847 1150 aa18.78■□□□□ 0.6
SQSTM1-215ENST00000514093 GUCA1CO95843 209 aa18.78■□□□□ 0.6
SQSTM1-215ENST00000514093 LY6G6DO95868 133 aa18.78■□□□□ 0.6
SQSTM1-215ENST00000514093 IFNA16P05015 189 aa18.78■□□□□ 0.6
SQSTM1-215ENST00000514093 CCL3P10147 92 aa18.78■□□□□ 0.6
SQSTM1-215ENST00000514093 SAT1P21673 171 aa18.78■□□□□ 0.6
SQSTM1-215ENST00000514093 REEP5Q00765 189 aa18.78■□□□□ 0.6
SQSTM1-215ENST00000514093 HSPB2Q16082 182 aa18.78■□□□□ 0.6
SQSTM1-215ENST00000514093 LRRC8EQ6NSJ5 796 aa18.78■□□□□ 0.6
SQSTM1-215ENST00000514093 UGT3A1Q6NUS8 523 aa18.78■□□□□ 0.6
SQSTM1-215ENST00000514093 FAM47BQ8NA70 645 aa18.78■□□□□ 0.6
SQSTM1-215ENST00000514093 TRPV3Q8NET8 790 aa18.78■□□□□ 0.6
SQSTM1-215ENST00000514093 LINC01560Q8TB33 94 aa18.78■□□□□ 0.6
SQSTM1-215ENST00000514093 RNASE6Q93091 150 aaKnown RBP18.78■□□□□ 0.6
SQSTM1-215ENST00000514093 REPIN1Q9BWE0 567 aaKnown RBP18.78■□□□□ 0.6
SQSTM1-215ENST00000514093 PLEKHF2Q9H8W4 249 aa18.78■□□□□ 0.6
SQSTM1-215ENST00000514093 NEUROD4Q9HD90 331 aa18.78■□□□□ 0.6
SQSTM1-215ENST00000514093 ADAP2Q9NPF8 381 aa18.78■□□□□ 0.6
SQSTM1-215ENST00000514093 SACM1LQ9NTJ5 587 aa18.78■□□□□ 0.6
SQSTM1-215ENST00000514093 MPDZO75970 2070 aa18.78■□□□□ 0.6
SQSTM1-215ENST00000514093 P04436 131 aa18.77■□□□□ 0.6
SQSTM1-215ENST00000514093 GABRA1P14867 456 aa18.77■□□□□ 0.6
SQSTM1-215ENST00000514093 PCSK6P29122 969 aa18.77■□□□□ 0.6
SQSTM1-215ENST00000514093 PIGAP37287 484 aa18.77■□□□□ 0.6
SQSTM1-215ENST00000514093 ASCL1P50553 236 aa18.77■□□□□ 0.6
SQSTM1-215ENST00000514093 PGGT1BP53609 377 aa18.77■□□□□ 0.6
SQSTM1-215ENST00000514093 HSD17B7P56937 341 aa18.77■□□□□ 0.6
SQSTM1-215ENST00000514093 SARNPP82979 210 aaKnown RBP18.77■□□□□ 0.6
SQSTM1-215ENST00000514093 CCZ1BP86790 482 aa18.77■□□□□ 0.6
SQSTM1-215ENST00000514093 CCZ1P86791 482 aaPredicted RBP18.77■□□□□ 0.6
SQSTM1-215ENST00000514093 HYAL4Q2M3T9 481 aa18.77■□□□□ 0.6
SQSTM1-215ENST00000514093 DRICH1Q6PGQ1 229 aaPredicted RBP18.77■□□□□ 0.6
SQSTM1-215ENST00000514093 ULK2Q8IYT8 1036 aa18.77■□□□□ 0.6
SQSTM1-215ENST00000514093 TNIP2Q8NFZ5 429 aa18.77■□□□□ 0.6
SQSTM1-215ENST00000514093 KIAA1191Q96A73 305 aa18.77■□□□□ 0.6
SQSTM1-215ENST00000514093 FAR2Q96K12 515 aa18.77■□□□□ 0.6
SQSTM1-215ENST00000514093 IARS2Q9NSE4 1012 aaKnown RBP18.77■□□□□ 0.6
SQSTM1-215ENST00000514093 ATG4BQ9Y4P1 393 aa18.77■□□□□ 0.6
SQSTM1-215ENST00000514093 CLCA3PQ9Y6N3 262 aa18.77■□□□□ 0.6
SQSTM1-215ENST00000514093 ARHGAP21Q5T5U3 1957 aa18.76■□□□□ 0.59
SQSTM1-215ENST00000514093 TUBAL3A6NHL2 446 aa18.76■□□□□ 0.59
SQSTM1-215ENST00000514093 SDR42E2A6NKP2 422 aa18.76■□□□□ 0.59
SQSTM1-215ENST00000514093 GOLGA8MH3BSY2 632 aa18.76■□□□□ 0.59
SQSTM1-215ENST00000514093 CLDN4O14493 209 aa18.76■□□□□ 0.59
SQSTM1-215ENST00000514093 DVL2O14641 736 aa18.76■□□□□ 0.59
SQSTM1-215ENST00000514093 HCN1O60741 890 aa18.76■□□□□ 0.59
SQSTM1-215ENST00000514093 SERPINA6P08185 405 aa18.76■□□□□ 0.59
SQSTM1-215ENST00000514093 RFPL3SP0C7P2 107 aa18.76■□□□□ 0.59
SQSTM1-215ENST00000514093 EPXP11678 715 aa18.76■□□□□ 0.59
SQSTM1-215ENST00000514093 CDKN2DP55273 166 aa18.76■□□□□ 0.59
SQSTM1-215ENST00000514093 DCAF7P61962 342 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms