RNA–Protein interactions for RNA: ENST00000514013.1

SH3D19-209, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-209ENST00000514013 EBNA1BP2Q99848 306 aaKnown RBP8.34□□□□□ -1.07
SH3D19-209ENST00000514013 FAM173AQ9BQD7 235 aa8.34□□□□□ -1.07
SH3D19-209ENST00000514013 SPNS1Q9H2V7 528 aa8.34□□□□□ -1.07
SH3D19-209ENST00000514013 EPB41L4BQ9H329 900 aa8.34□□□□□ -1.07
SH3D19-209ENST00000514013 LDAHQ9H6V9 325 aa8.34□□□□□ -1.07
SH3D19-209ENST00000514013 ZNF703Q9H7S9 590 aaPredicted RBP8.34□□□□□ -1.07
SH3D19-209ENST00000514013 CHRAC1Q9NRG0 131 aa8.34□□□□□ -1.07
SH3D19-209ENST00000514013 TREX1Q9NSU2 369 aa8.34□□□□□ -1.07
SH3D19-209ENST00000514013 JKAMPQ9P055 326 aa8.34□□□□□ -1.07
SH3D19-209ENST00000514013 MTRF1LQ9UGC7 380 aaKnown RBP8.34□□□□□ -1.07
SH3D19-209ENST00000514013 MED16Q9Y2X0 877 aa8.34□□□□□ -1.07
SH3D19-209ENST00000514013 YARS2Q9Y2Z4 477 aaKnown RBP8.34□□□□□ -1.07
SH3D19-209ENST00000514013 USF3Q68DE3 2245 aa8.34□□□□□ -1.07
SH3D19-209ENST00000514013 CHD3Q12873 2000 aaKnown RBP8.34□□□□□ -1.07
SH3D19-209ENST00000514013 LRRC3CA6NJW4 275 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 SMTNL1A8MU46 457 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 EEF1E1-BLOC1S5C9J1V9 151 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 FAM47E-STBD1D6RA91 191 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 NDUFS4O43181 175 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 EEF1E1O43324 174 aaKnown RBP8.33□□□□□ -1.08
SH3D19-209ENST00000514013 HCN1O60741 890 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 NDUFS3O75489 264 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 ZNF888P0CJ79 500 aaPredicted RBP8.33□□□□□ -1.08
SH3D19-209ENST00000514013 CDH1P12830 882 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 CNR1P21554 472 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 NMBRP28336 390 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 PTPN7P35236 360 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 CYLC1P35663 651 aaPredicted RBP8.33□□□□□ -1.08
SH3D19-209ENST00000514013 HSD17B2P37059 387 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 PIGAP37287 484 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 SKIV2L2P42285 1042 aaKnown RBP8.33□□□□□ -1.08
SH3D19-209ENST00000514013 HNRNPFP52597 415 aaKnown RBP8.33□□□□□ -1.08
SH3D19-209ENST00000514013 HADHBP55084 474 aaKnown RBP8.33□□□□□ -1.08
SH3D19-209ENST00000514013 CUL1Q13616 776 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 SLC10A1Q14973 349 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 HERC3Q15034 1050 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 RPS6KA1Q15418 735 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 P3H1Q32P28 736 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 MEI1Q5TIA1 1274 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 MBOAT1Q6ZNC8 495 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 FAM47EQ6ZV65 393 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 PRUNE1Q86TP1 453 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 LINC00523Q86TU6 105 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 LRRC6Q86X45 466 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 GPALPP1Q8IXQ4 340 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 ZNF321PQ8N8H1 164 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 MFSD9Q8NBP5 474 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 MAPK1IP1LQ8NDC0 245 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 TMEM52Q8NDY8 209 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 OR8K1Q8NGG5 319 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 ASB11Q8WXH4 323 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 SMPDL3BQ92485 455 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 LRRC45Q96CN5 670 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 VMP1Q96GC9 406 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 MRFAP1L1Q96HT8 127 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 PIGQQ9BRB3 760 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 AICDAQ9GZX7 198 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 NAT10Q9H0A0 1025 aaKnown RBP8.33□□□□□ -1.08
SH3D19-209ENST00000514013 RHBGQ9H310 441 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 EXO5Q9H790 373 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 NHEJ1Q9H9Q4 299 aaPredicted RBP8.33□□□□□ -1.08
SH3D19-209ENST00000514013 PRM3Q9NNZ6 103 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 PNO1Q9NRX1 252 aaKnown RBP8.33□□□□□ -1.08
SH3D19-209ENST00000514013 FAM114A2Q9NRY5 505 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 MYOTQ9UBF9 498 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 ZNF629Q9UEG4 869 aaPredicted RBP8.33□□□□□ -1.08
SH3D19-209ENST00000514013 FOXD3Q9UJU5 478 aaPredicted RBP8.33□□□□□ -1.08
SH3D19-209ENST00000514013 ANAPC5Q9UJX4 755 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 EFR3BQ9Y2G0 817 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 CRYL1Q9Y2S2 319 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 ATG4BQ9Y4P1 393 aa8.33□□□□□ -1.08
SH3D19-209ENST00000514013 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.32□□□□□ -1.083e-6■■■□□ 15.3
SH3D19-209ENST00000514013 ABCA1O95477 2261 aa8.32□□□□□ -1.08
SH3D19-209ENST00000514013 TCRBV7S2A1N4TA0A589 114 aa8.32□□□□□ -1.08
SH3D19-209ENST00000514013 DEFB108AA8MXU0 73 aa8.32□□□□□ -1.08
SH3D19-209ENST00000514013 GFYI3L273 518 aa8.32□□□□□ -1.08
SH3D19-209ENST00000514013 PHF1O43189 567 aaPredicted RBP8.32□□□□□ -1.08
SH3D19-209ENST00000514013 CEP104O60308 925 aa8.32□□□□□ -1.08
SH3D19-209ENST00000514013 ZFAND5O76080 213 aa8.32□□□□□ -1.08
SH3D19-209ENST00000514013 EPPINO95925 133 aa8.32□□□□□ -1.08
SH3D19-209ENST00000514013 SLC35G6P0C7Q6 338 aa8.32□□□□□ -1.08
SH3D19-209ENST00000514013 BMP7P18075 431 aa8.32□□□□□ -1.08
SH3D19-209ENST00000514013 CTNNA1P35221 906 aaKnown RBP8.32□□□□□ -1.08
SH3D19-209ENST00000514013 PPARGP37231 505 aaPredicted RBP8.32□□□□□ -1.08
SH3D19-209ENST00000514013 ANP32AP39687 249 aaKnown RBP8.32□□□□□ -1.08
SH3D19-209ENST00000514013 TRPC1P48995 793 aa8.32□□□□□ -1.08
SH3D19-209ENST00000514013 CLCN7P51798 805 aa8.32□□□□□ -1.08
SH3D19-209ENST00000514013 HK2P52789 917 aa8.32□□□□□ -1.08
SH3D19-209ENST00000514013 NR1H2P55055 460 aa8.32□□□□□ -1.08
SH3D19-209ENST00000514013 UBASH3AP57075 661 aa8.32□□□□□ -1.08
SH3D19-209ENST00000514013 RAB8AP61006 207 aa8.32□□□□□ -1.08
SH3D19-209ENST00000514013 TERF2Q15554 542 aa8.32□□□□□ -1.08
SH3D19-209ENST00000514013 CATSPEREQ5SY80 951 aa8.32□□□□□ -1.08
SH3D19-209ENST00000514013 C11orf63Q6NUN7 778 aa8.32□□□□□ -1.08
SH3D19-209ENST00000514013 CES3Q6UWW8 571 aa8.32□□□□□ -1.08
SH3D19-209ENST00000514013 CYHR1Q6ZMK1 362 aa8.32□□□□□ -1.08
SH3D19-209ENST00000514013 RTL4Q6ZR62 310 aa8.32□□□□□ -1.08
SH3D19-209ENST00000514013 ABHD13Q7L211 337 aa8.32□□□□□ -1.08
SH3D19-209ENST00000514013 PIWIL4Q7Z3Z4 852 aaKnown RBP8.32□□□□□ -1.08
SH3D19-209ENST00000514013 MAATS1Q7Z4T9 603 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms