RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 PTPN13Q12923 2485 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 NAV2Q8IVL1 2488 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 HECTD1Q9ULT8 2610 aa9.62□□□□□ -0.87
NEDD9-214ENST00000513989 C9J4A7 227 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 STMND1H3BQB6 276 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 SGK494L7N484 410 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 RTCAO00442 366 aaKnown RBP9.61□□□□□ -0.87
NEDD9-214ENST00000513989 CLDN4O14493 209 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 SDHDO14521 159 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 ZNF195O14628 629 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 UBDO15205 165 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 PCDH7O60245 1069 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 SHOX2O60902 331 aaPredicted RBP9.61□□□□□ -0.87
NEDD9-214ENST00000513989 DXOO77932 396 aaKnown RBP9.61□□□□□ -0.87
NEDD9-214ENST00000513989 ETHE1O95571 254 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 TBX6O95947 436 aaPredicted RBP9.61□□□□□ -0.87
NEDD9-214ENST00000513989 ALBP02768 609 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 ANXA4P09525 319 aaPredicted RBP9.61□□□□□ -0.87
NEDD9-214ENST00000513989 FAM58BPP0C7Q3 252 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 RNH1P13489 461 aaKnown RBP9.61□□□□□ -0.87
NEDD9-214ENST00000513989 IL1RNP18510 177 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 ITGAXP20702 1163 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 FBLP22087 321 aaKnown RBP9.61□□□□□ -0.87
NEDD9-214ENST00000513989 EPHA3P29320 983 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 SLC5A2P31639 672 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 BSGP35613 385 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 ETV5P41161 510 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 BUD31P41223 144 aaPredicted RBP9.61□□□□□ -0.87
NEDD9-214ENST00000513989 ASMTP46597 345 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 ERVK-8P63133 956 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 RPL38P63173 70 aaKnown RBP9.61□□□□□ -0.87
NEDD9-214ENST00000513989 DSG2Q14126 1118 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 MAP7Q14244 749 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 HEPACAMQ14CZ8 416 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 NKAIN1Q4KMZ8 207 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 SLC9B1Q4ZJI4 515 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 RFTN2Q52LD8 501 aaPredicted RBP9.61□□□□□ -0.87
NEDD9-214ENST00000513989 C6orf136Q5SQH8 315 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 ARHGAP40Q5TG30 622 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 VWA5B1Q5TIE3 1220 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 GKAP1Q5VSY0 366 aaPredicted RBP9.61□□□□□ -0.87
NEDD9-214ENST00000513989 PRAMEF17Q5VTA0 474 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 SPATA21Q7Z572 469 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 UBE3DQ7Z6J8 389 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 GPR180Q86V85 440 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 DSELQ8IZU8 1212 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 OR9A4Q8NGU2 314 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 SLC39A7Q92504 469 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 MR1Q95460 341 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 THOC1Q96FV9 657 aaKnown RBP9.61□□□□□ -0.87
NEDD9-214ENST00000513989 ZNF578Q96N58 590 aaPredicted RBP9.61□□□□□ -0.87
NEDD9-214ENST00000513989 CCT8L2Q96SF2 557 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 RABEP2Q9H5N1 569 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 SYNPO2LQ9H987 977 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 MKKSQ9NPJ1 570 aaPredicted RBP9.61□□□□□ -0.87
NEDD9-214ENST00000513989 DHCR7Q9UBM7 475 aaKnown RBP9.61□□□□□ -0.87
NEDD9-214ENST00000513989 MRPS33Q9Y291 106 aaKnown RBP9.61□□□□□ -0.87
NEDD9-214ENST00000513989 MAP4K5Q9Y4K4 846 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 PTGDR2Q9Y5Y4 395 aa9.61□□□□□ -0.87
NEDD9-214ENST00000513989 UBR5O95071 2799 aaPredicted RBP9.6□□□□□ -0.87
NEDD9-214ENST00000513989 A0A0G2JN53 185 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 C9orf172C9J069 976 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 CHST10O43529 356 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 FOXS1O43638 330 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 CCDC22O60826 627 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 SCELO95171 688 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 ZIC2O95409 532 aaPredicted RBP9.6□□□□□ -0.87
NEDD9-214ENST00000513989 ONECUT2O95948 504 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 DRD2P14416 443 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 IDO1P14902 403 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 DRD4P21917 467 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 CPN2P22792 545 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 JAK1P23458 1154 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 PPP2R1BP30154 601 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 TIA1P31483 386 aaKnown RBP eCLIP9.6□□□□□ -0.87
NEDD9-214ENST00000513989 RPL3P39023 403 aaKnown RBP9.6□□□□□ -0.87
NEDD9-214ENST00000513989 OR1D4P47884 311 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 STX1BP61266 288 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 RPS15P62841 145 aaKnown RBP9.6□□□□□ -0.87
NEDD9-214ENST00000513989 BIKQ13323 160 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 KIAA0040Q15053 153 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 GSTA3Q16772 222 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 LSM12Q3MHD2 195 aaKnown RBP9.6□□□□□ -0.87
NEDD9-214ENST00000513989 IL23RQ5VWK5 629 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 MLIPQ5VWP3 458 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 OGFOD2Q6N063 350 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 LRRC69Q6ZNQ3 347 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 OVCH1Q7RTY7 1134 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 NLGN4XQ8N0W4 816 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 TMEM132CQ8N3T6 1108 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 ARHGEF39Q8N4T4 335 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 ANKS4BQ8N8V4 417 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 GALNT6Q8NCL4 622 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 NLGN4YQ8NFZ3 816 aaPredicted RBP9.6□□□□□ -0.87
NEDD9-214ENST00000513989 OR2T11Q8NH01 316 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 OR51Q1Q8NH59 317 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 RFWD2Q8NHY2 731 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 STARD8Q92502 1023 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 TBC1D20Q96BZ9 403 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 MAELQ96JY0 434 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms