RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 FADS2O95864 444 aaKnown RBP8.61□□□□□ -1.03
VCAN-208ENST00000512590 PROS1P07225 676 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 CHRM1P11229 460 aaPredicted RBP8.61□□□□□ -1.03
VCAN-208ENST00000512590 TDGQ13569 410 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 ESPNLQ6ZVH7 1005 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 RDH10Q8IZV5 341 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 ANKLE1Q8NAG6 615 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 LIN37Q96GY3 246 aaPredicted RBP8.61□□□□□ -1.03
VCAN-208ENST00000512590 GPR62Q9BZJ7 368 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 ACOXLQ9NUZ1 547 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 MYEF2Q9P2K5 600 aaKnown RBP8.61□□□□□ -1.03
VCAN-208ENST00000512590 OR14J1Q9UGF5 321 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 ACSL5Q9ULC5 683 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 PRPF19Q9UMS4 504 aaKnown RBP8.61□□□□□ -1.03
VCAN-208ENST00000512590 PAK4O96013 591 aaPredicted RBP8.61□□□□□ -1.03
VCAN-208ENST00000512590 YES1P07947 543 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 FGF4P08620 206 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 EFNA1P20827 205 aaPredicted RBP8.61□□□□□ -1.03
VCAN-208ENST00000512590 EPHA1P21709 976 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 HTR7P34969 479 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 MADCAM1Q13477 382 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 SF3A2Q15428 464 aaKnown RBP8.61□□□□□ -1.03
VCAN-208ENST00000512590 GFRALQ6UXV0 394 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 PPP1R3BQ86XI6 285 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 MTMR14Q8NCE2 650 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 AGBL5Q8NDL9 886 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 SLC2A12Q8TD20 617 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 DIRAS2Q96HU8 199 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 OR5B2Q96R09 309 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 TRIB1Q96RU8 372 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 HNRNPABQ99729 332 aaKnown RBP8.61□□□□□ -1.03
VCAN-208ENST00000512590 FKRPQ9H9S5 495 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 TM7SF3Q9NS93 570 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 MAGEL2Q9UJ55 1249 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 STXBP5LQ9Y2K9 1186 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 REXO2Q9Y3B8 237 aaKnown RBP8.61□□□□□ -1.03
VCAN-208ENST00000512590 KLRG2A4D1S0 409 aaPredicted RBP8.61□□□□□ -1.03
VCAN-208ENST00000512590 SIGLEC16A6NMB1 481 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 A8MVM7 634 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 BCAT2O15382 392 aaPredicted RBP8.61□□□□□ -1.03
VCAN-208ENST00000512590 CLCN4P51793 760 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 SEC24CP53992 1094 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 INHBCP55103 352 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 CAPSQ13938 189 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 TAF1AQ15573 450 aaPredicted RBP8.61□□□□□ -1.03
VCAN-208ENST00000512590 MYLK3Q32MK0 819 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 LY6G5CQ5SRR4 150 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 ANKRD26P1Q6NSI1 321 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 NIPAL3Q6P499 406 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 C12orf29Q8N999 325 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 RAB7BQ96AH8 199 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 HSPBAP1Q96EW2 488 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 ISCUQ9H1K1 167 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 TMEM185BQ9H7F4 350 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 SPAG4Q9NPE6 437 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 CHADO15335 359 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 AHSGP02765 367 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 ADORA3P0DMS8 318 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 EDN3P14138 238 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 MAGEA11P43364 429 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 NDST2P52849 883 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 UBE2G2P60604 165 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 AUHQ13825 339 aaKnown RBP8.61□□□□□ -1.03
VCAN-208ENST00000512590 PLEKHN1Q494U1 663 aaPredicted RBP8.61□□□□□ -1.03
VCAN-208ENST00000512590 IFI44LQ53G44 452 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 MAMDC2Q7Z304 686 aaPredicted RBP8.61□□□□□ -1.03
VCAN-208ENST00000512590 OR4K14Q8NGD5 310 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 SLC44A1Q8WWI5 657 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 METTL2AQ96IZ6 378 aaKnown RBP8.61□□□□□ -1.03
VCAN-208ENST00000512590 FAM234AQ9H0X4 552 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 SACM1LQ9NTJ5 587 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 MS4A12Q9NXJ0 267 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.61□□□□□ -1.03
VCAN-208ENST00000512590 COPZ2Q9P299 210 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 PCTPQ9UKL6 214 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 U3KQV3 271 aa8.61□□□□□ -1.03
VCAN-208ENST00000512590 RCCD1A6NED2 376 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 ABLIM1O14639 778 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 PER1O15534 1290 aaPredicted RBP8.6□□□□□ -1.03
VCAN-208ENST00000512590 CSTAP01040 98 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 KLK1P06870 262 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 DHRS4L1P0CG22 281 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 KLF10Q13118 480 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 SERINC3Q13530 473 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 NPTX1Q15818 432 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 TATDN3Q17R31 274 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 NANOGP8Q6NSW7 305 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 USP30Q70CQ3 517 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 MAP4K3Q8IVH8 894 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 PGAM4Q8N0Y7 254 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 ZNF619Q8N2I2 560 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 OR4K15Q8NH41 348 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 ZNF576Q9H609 170 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 GABARAPH6UMI1 98 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 PLK4O00444 970 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 GABARAPO95166 117 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 ITGB1P05556 798 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 POU2F1P14859 743 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 ZNF30P17039 623 aa8.6□□□□□ -1.03
VCAN-208ENST00000512590 MAPK3P27361 379 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms