RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 CEACAM4O75871 244 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 TIAF1O95411 115 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 KRT16P08779 473 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 C1GALT1C1LP0DN25 315 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 PRPS2P11908 318 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 F3P13726 295 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 COX6B1P14854 86 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 CD22P20273 847 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 CXCR2P25025 360 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 FASLGP48023 281 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 RPS15P62841 145 aaKnown RBP9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 RELAQ04206 551 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 DOC2AQ14183 400 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 KIR2DS5Q14953 304 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 RPE65Q16518 533 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 PRAMEF13Q5VWM6 474 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 C8orf82Q6P1X6 216 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 BLOC1S3Q6QNY0 202 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 NXPE4Q6UWF7 544 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 C16orf89Q6UX73 402 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 MSANTD1Q6ZTZ1 278 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 FUNDC1Q8IVP5 155 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 PGAM4Q8N0Y7 254 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 DPP10Q8N608 796 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 ST6GALNAC3Q8NDV1 305 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 OR5AR1Q8NGP9 310 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 SLC5A11Q8WWX8 675 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 SELENOMQ8WWX9 145 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 NANOS1Q8WY41 292 aaKnown RBP9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 NEIL2Q969S2 332 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 PYCR2Q96C36 320 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 ACPTQ9BZG2 426 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 RHBGQ9H310 441 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 POT1Q9NUX5 634 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 NMRK1Q9NWW6 199 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 GPR83Q9NYM4 423 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 TSR3Q9UJK0 312 aaKnown RBP9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 ZNF490Q9ULM2 529 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 BTRCQ9Y297 605 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 B3GNT3Q9Y2A9 372 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 WDR37Q9Y2I8 494 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 WBP11Q9Y2W2 641 aaKnown RBP9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 NDUFAF1Q9Y375 327 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 FIS1Q9Y3D6 152 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 DYRK1BQ9Y463 629 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 NAV3Q8IVL0 2385 aa9.96□□□□□ -0.82
PDLIM5-217ENST00000512274 ATP6AP2A0A1C7CYW4 349 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 A0A1W2PPV9 198 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 FAM234BA2RU67 622 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 E7EQ34 232 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 ATP6AP2O75787 350 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 SEMA3DO95025 777 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 CCNDBP1O95273 360 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 XRCC1P18887 633 aaPredicted RBP9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 SHMT2P34897 504 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 PTGER4P35408 488 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 ZFP36L2P47974 494 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 KCNJ2P63252 427 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 PRKG2Q13237 762 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 CPSF6Q16630 551 aaKnown RBP eCLIP9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 HIST2H2ACQ16777 129 aaPredicted RBP9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 DPY19L1Q2PZI1 675 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 AP5B1Q2VPB7 878 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 XKR6Q5GH73 641 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 TCHHL1Q5QJ38 904 aaPredicted RBP9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 WASHC2DQ5SRD0 308 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 FAM69BQ5VUD6 431 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 HIST2H2AA3Q6FI13 130 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 MED27Q6P2C8 311 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 RINLQ6ZS11 566 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 CDH24Q86UP0 819 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 SNX32Q86XE0 403 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 HPS6Q86YV9 775 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 PLXDC1Q8IUK5 500 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 FNDC5Q8NAU1 212 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 OR7G3Q8NG95 312 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 DNAJB8Q8NHS0 232 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 C12orf66Q96MD2 445 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 TGM7Q96PF1 710 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 SMAD5Q99717 465 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 UCK1Q9HA47 277 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 LRTM1Q9HBL6 345 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 EIF3LQ9Y262 564 aaKnown RBP9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 FER1L5A0AVI2 2057 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 ZGRF1Q86YA3 2104 aa9.95□□□□□ -0.82
PDLIM5-217ENST00000512274 A0A1W2PP18 115 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 H0YHG0 523 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 NRP2O60462 931 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 PEX11AO75192 247 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 EEDO75530 441 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 SLC22A3O75751 556 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 PDYNP01213 254 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 TYRP1P17643 537 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 ITGAXP20702 1163 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 GSTM5P46439 218 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 CLNS1AP54105 237 aaKnown RBP9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 DIO3P55073 304 aa9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 ELF3P78545 371 aaPredicted RBP9.94□□□□□ -0.82
PDLIM5-217ENST00000512274 PHEXP78562 749 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms