RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 FBXW8Q8N3Y1 598 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 MEIOBQ8N635 442 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 KCT2Q8NC54 265 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 ASZ1Q8WWH4 475 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 ROBO4Q8WZ75 1007 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 ISL2Q96A47 359 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 RUNDC3BQ96NL0 473 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 TBL1YQ9BQ87 522 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 FAM173AQ9BQD7 235 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 FERMT1Q9BQL6 677 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 RBM24Q9BX46 236 aaKnown RBP8.41□□□□□ -1.06
NUP54-211ENST00000512151 TRIM31Q9BZY9 425 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 SLC6A15Q9H2J7 730 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 DPH5Q9H2P9 285 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 EXO5Q9H790 373 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 ARNT2Q9HBZ2 717 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 GALNT8Q9NY28 637 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 FAM53CQ9NYF3 392 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 SPATA7Q9P0W8 599 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 FEZ2Q9UHY8 353 aaPredicted RBP8.41□□□□□ -1.06
NUP54-211ENST00000512151 TSR3Q9UJK0 312 aaKnown RBP8.41□□□□□ -1.06
NUP54-211ENST00000512151 SNX24Q9Y343 169 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 NAALAD2Q9Y3Q0 740 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 TESMINQ9Y4I5 508 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 WIF1Q9Y5W5 379 aa8.41□□□□□ -1.06
NUP54-211ENST00000512151 A8MV72 311 aaPredicted RBP8.4□□□□□ -1.06
NUP54-211ENST00000512151 A8MVJ9 347 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 ATP8B1O43520 1251 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 ZNF189O75820 626 aaPredicted RBP8.4□□□□□ -1.06
NUP54-211ENST00000512151 OR2J2O76002 312 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 GAS8O95995 478 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 APOA4P06727 396 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 FHP07954 510 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 PKMP14618 531 aaKnown RBP8.4□□□□□ -1.06
NUP54-211ENST00000512151 CNR1P21554 472 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 RPA3P35244 121 aaPredicted RBP8.4□□□□□ -1.06
NUP54-211ENST00000512151 FDFT1P37268 417 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 SOX3P41225 446 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 ADARP55265 1226 aaKnown RBP8.4□□□□□ -1.06
NUP54-211ENST00000512151 OLR1P78380 273 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 BASP1P80723 227 aaKnown RBP8.4□□□□□ -1.06
NUP54-211ENST00000512151 RELAQ04206 551 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 TEX35Q5T0J7 233 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 RNASEH2BQ5TBB1 312 aaKnown RBP8.4□□□□□ -1.06
NUP54-211ENST00000512151 C8orf74Q6P047 294 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 TTC23LQ6PF05 361 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 C4orf22Q6V702 233 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 GK5Q6ZS86 529 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 ZNF534Q76KX8 674 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 ADCK2Q7Z695 626 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 NAT8LQ8N9F0 302 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 PPFIBP2Q8ND30 876 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 MCOLN3Q8TDD5 553 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 SMPDL3AQ92484 453 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 PIK3IP1Q96FE7 263 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 PTCHD1Q96NR3 888 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 OR1F2PQ96R84 312 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 ERP44Q9BS26 406 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 REG4Q9BYZ8 158 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 AMBRA1Q9C0C7 1298 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 ANKHQ9HCJ1 492 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 NECTIN3Q9NQS3 549 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 ZNF701Q9NV72 531 aaPredicted RBP8.4□□□□□ -1.06
NUP54-211ENST00000512151 PIH1D1Q9NWS0 290 aaKnown RBP8.4□□□□□ -1.06
NUP54-211ENST00000512151 HPF1Q9NWY4 346 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 GRHL1Q9NZI5 618 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 ASIC3Q9UHC3 531 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 AAR2Q9Y312 384 aaKnown RBP8.4□□□□□ -1.06
NUP54-211ENST00000512151 DYSFO75923 2080 aa8.4□□□□□ -1.06
NUP54-211ENST00000512151 IGKV3D-11A0A0A0MRZ8 115 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 TCRBV16S1A1N1A0A5B0 115 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 ESYT3A0FGR9 886 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 H7BY64 318 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 CASKO14936 926 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 CHST10O43529 356 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 ZNF354AO60765 605 aaPredicted RBP8.39□□□□□ -1.07
NUP54-211ENST00000512151 IL2RAP01589 272 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 TP53P04637 393 aaPredicted RBP8.39□□□□□ -1.07
NUP54-211ENST00000512151 TUBBP07437 444 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 RHOXF2BP0C7M4 288 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 CCL3P10147 92 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 TPSB2P20231 275 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 CTSSP25774 331 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 MAGEA6P43360 314 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 TRPC1P48995 793 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 CLCN2P51788 898 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 GPR143P51810 404 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 ATP5J2P56134 94 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 FOXF2Q12947 444 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 PRPSAP1Q14558 356 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 POU6F1Q14863 301 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 TPSAB1Q15661 275 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 ZDHHC24Q6UX98 284 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 C20orf204Q6ZNR8 217 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 LDB1Q86U70 411 aaPredicted RBP8.39□□□□□ -1.07
NUP54-211ENST00000512151 LACC1Q8IV20 430 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 AGGF1Q8N302 714 aaeCLIP8.39□□□□□ -1.07
NUP54-211ENST00000512151 RAB42Q8N4Z0 105 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 OR52K1Q8NGK4 314 aa8.39□□□□□ -1.07
NUP54-211ENST00000512151 OR6P1Q8NGX9 317 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms