RNA–Protein interactions for RNA: ENST00000512130.5

LINC01088-209, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 3

Gene LINC01088, Length 525 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-209	ENST00000512130	RBM4	Q9BWF3	364 aa	Known RBP	4.88	□□□□□ -1.63
LINC01088-209	ENST00000512130	GAN	Q9H2C0	597 aa		4.88	□□□□□ -1.63
LINC01088-209	ENST00000512130	SYTL2	Q9HCH5	934 aa		4.88	□□□□□ -1.63
LINC01088-209	ENST00000512130	SPHK2	Q9NRA0	654 aa		4.88	□□□□□ -1.63
LINC01088-209	ENST00000512130	ACOXL	Q9NUZ1	547 aa		4.88	□□□□□ -1.63
LINC01088-209	ENST00000512130	CCPG1	Q9ULG6	757 aa		4.88	□□□□□ -1.63
LINC01088-209	ENST00000512130	RPH3A	Q9Y2J0	694 aa	Predicted RBP	4.88	□□□□□ -1.63
LINC01088-209	ENST00000512130	PYGO1	Q9Y3Y4	419 aa		4.88	□□□□□ -1.63
LINC01088-209	ENST00000512130	NEDD4	P46934	1319 aa		4.88	□□□□□ -1.63
LINC01088-209	ENST00000512130	DHX29	Q7Z478	1369 aa	Known RBP	4.88	□□□□□ -1.63
LINC01088-209	ENST00000512130	ATP6AP2	A0A1C7CYW4	349 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	MACROD2	A1Z1Q3	448 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	SERINC4	A6NH21	518 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	LMO7DN	F2Z398	122 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	EEF2K	O00418	725 aa	Known RBP	4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	CHEK1	O14757	476 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	SIGLEC5	O15389	551 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	P2RX6	O15547	441 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	B4GAT1	O43505	415 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	LRCH4	O75427	683 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	REC8	O95072	547 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	CLDN1	O95832	211 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	SLC4A1	P02730	911 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	SERPINF2	P08697	491 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	CT45A8	P0DMV1	189 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	CT45A9	P0DMV2	189 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	MYOG	P15173	224 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	ZNF26	P17031	533 aa	Predicted RBP	4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	PTMS	P20962	102 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	PRKACG	P22612	351 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	ALDH3B1	P43353	468 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	CNN1	P51911	297 aa	Known RBP	4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	HNRNPF	P52597	415 aa	Known RBP	4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	GEM	P55040	296 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	STARD6	P59095	220 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	SRP54	P61011	504 aa	Known RBP	4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	ABCE1	P61221	599 aa	Known RBP	4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	SST	P61278	116 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	CCZ1B	P86790	482 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	CCZ1	P86791	482 aa	Predicted RBP	4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	HEPACAM	Q14CZ8	416 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	PDK1	Q15118	436 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	PKN2	Q16513	984 aa	Known RBP	4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	RFTN2	Q52LD8	501 aa	Predicted RBP	4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	CT45A2	Q5DJT8	189 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	LCE1A	Q5T7P2	110 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	DLEU7	Q6UYE1	221 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	DND1	Q8IYX4	353 aa	Known RBP	4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	HDDC3	Q8N4P3	179 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	NUP37	Q8NFH4	326 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	OR9Q2	Q8NGE9	314 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	OR2T6	Q8NHC8	308 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	KIAA1524	Q8TCG1	905 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	CD99L2	Q8TCZ2	262 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	SLCO2A1	Q92959	643 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	GLYATL1	Q969I3	302 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	NSMCE2	Q96MF7	247 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	SPATA13	Q96N96	652 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	XPO4	Q9C0E2	1151 aa	Known RBP	4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	C1orf21	Q9H246	121 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	KCNMB3	Q9NPA1	279 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	MED17	Q9NVC6	651 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	NLGN3	Q9NZ94	848 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	KLK11	Q9UBX7	282 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	KCNN3	Q9UGI6	736 aa		4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	MRTO4	Q9UKD2	239 aa	Known RBP	4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	MRPS2	Q9Y399	296 aa	Known RBP	4.87	□□□□□ -1.63
LINC01088-209	ENST00000512130	NR5A2	O00482	541 aa		4.86	□□□□□ -1.63
LINC01088-209	ENST00000512130	INPP4B	O15327	924 aa		4.86	□□□□□ -1.63
LINC01088-209	ENST00000512130	CPNE6	O95741	557 aa		4.86	□□□□□ -1.63
LINC01088-209	ENST00000512130	B4GALT1	P15291	398 aa		4.86	□□□□□ -1.63
LINC01088-209	ENST00000512130	TRADD	Q15628	312 aa		4.86	□□□□□ -1.63
LINC01088-209	ENST00000512130	CARTPT	Q16568	116 aa		4.86	□□□□□ -1.63
LINC01088-209	ENST00000512130	KIF6	Q6ZMV9	814 aa		4.86	□□□□□ -1.63
LINC01088-209	ENST00000512130	ADAD2	Q8NCV1	583 aa	Known RBP	4.86	□□□□□ -1.63
LINC01088-209	ENST00000512130	ANKRD20A12P	Q8NF67	263 aa		4.86	□□□□□ -1.63
LINC01088-209	ENST00000512130	TMEM185A	Q8NFB2	350 aa		4.86	□□□□□ -1.63
LINC01088-209	ENST00000512130	OR6M1	Q8NGM8	313 aa		4.86	□□□□□ -1.63
LINC01088-209	ENST00000512130	C8orf46	Q8TAG6	207 aa		4.86	□□□□□ -1.63
LINC01088-209	ENST00000512130	ZNF519	Q8TB69	540 aa		4.86	□□□□□ -1.63
LINC01088-209	ENST00000512130	FAM218A	Q96MZ4	157 aa		4.86	□□□□□ -1.63
LINC01088-209	ENST00000512130	ZNF300	Q96RE9	604 aa	Predicted RBP	4.86	□□□□□ -1.63
LINC01088-209	ENST00000512130	AGPAT1	Q99943	283 aa		4.86	□□□□□ -1.63
LINC01088-209	ENST00000512130	NUSAP1	Q9BXS6	441 aa	Known RBP	4.86	□□□□□ -1.63
LINC01088-209	ENST00000512130	KCNK13	Q9HB14	408 aa		4.86	□□□□□ -1.63
LINC01088-209	ENST00000512130	HOMER3	Q9NSC5	361 aa		4.86	□□□□□ -1.63
LINC01088-209	ENST00000512130	TEX10	Q9NXF1	929 aa	Predicted RBP	4.86	□□□□□ -1.63
LINC01088-209	ENST00000512130	NARF	Q9UHQ1	456 aa		4.86	□□□□□ -1.63
LINC01088-209	ENST00000512130	WIPI2	Q9Y4P8	454 aa		4.86	□□□□□ -1.63
LINC01088-209	ENST00000512130	OR1A2	Q9Y585	309 aa		4.86	□□□□□ -1.63
LINC01088-209	ENST00000512130	CCDC69	A6NI79	296 aa		4.85	□□□□□ -1.63
LINC01088-209	ENST00000512130	SSX5	O60225	188 aa		4.85	□□□□□ -1.63
LINC01088-209	ENST00000512130	CXCL14	O95715	111 aa		4.85	□□□□□ -1.63
LINC01088-209	ENST00000512130	PTMA	P06454	111 aa	Known RBP	4.85	□□□□□ -1.63
LINC01088-209	ENST00000512130	TPBGL	P0DKB5	382 aa		4.85	□□□□□ -1.63
LINC01088-209	ENST00000512130	PDHA2	P29803	388 aa		4.85	□□□□□ -1.63
LINC01088-209	ENST00000512130	SFN	P31947	248 aa		4.85	□□□□□ -1.63
LINC01088-209	ENST00000512130	OR1D2	P34982	312 aa		4.85	□□□□□ -1.63
LINC01088-209	ENST00000512130	EVC	P57679	992 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms