RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 GPR22Q99680 433 aa5.48□□□□□ -1.53
RNF4-217ENST00000511892 NPAS2Q99743 824 aa5.48□□□□□ -1.53
RNF4-217ENST00000511892 CPNE1Q99829 537 aa5.48□□□□□ -1.53
RNF4-217ENST00000511892 TMEM79Q9BSE2 394 aa5.48□□□□□ -1.53
RNF4-217ENST00000511892 TUBB6Q9BUF5 446 aa5.48□□□□□ -1.53
RNF4-217ENST00000511892 RBCK1Q9BYM8 510 aa5.48□□□□□ -1.53
RNF4-217ENST00000511892 SLC29A3Q9BZD2 475 aa5.48□□□□□ -1.53
RNF4-217ENST00000511892 DERL2Q9GZP9 239 aa5.48□□□□□ -1.53
RNF4-217ENST00000511892 EPS8L2Q9H6S3 715 aa5.48□□□□□ -1.53
RNF4-217ENST00000511892 PELI2Q9HAT8 420 aa5.48□□□□□ -1.53
RNF4-217ENST00000511892 POPDC3Q9HBV1 291 aa5.48□□□□□ -1.53
RNF4-217ENST00000511892 GPAMQ9HCL2 828 aa5.48□□□□□ -1.53
RNF4-217ENST00000511892 RIC8BQ9NVN3 520 aa5.48□□□□□ -1.53
RNF4-217ENST00000511892 TXNDC16Q9P2K2 825 aa5.48□□□□□ -1.53
RNF4-217ENST00000511892 CTNNAL1Q9UBT7 734 aa5.48□□□□□ -1.53
RNF4-217ENST00000511892 TBK1Q9UHD2 729 aa5.48□□□□□ -1.53
RNF4-217ENST00000511892 ZFP69BQ9UJL9 534 aa5.48□□□□□ -1.53
RNF4-217ENST00000511892 ERRFI1Q9UJM3 462 aaPredicted RBP5.48□□□□□ -1.53
RNF4-217ENST00000511892 NCKAP5O14513 1909 aa5.48□□□□□ -1.53
RNF4-217ENST00000511892 NINQ8N4C6 2090 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 PABPN1LA6NDY0 278 aaKnown RBP5.47□□□□□ -1.53
RNF4-217ENST00000511892 NCF1BA6NI72 391 aaPredicted RBP5.47□□□□□ -1.53
RNF4-217ENST00000511892 A8MUI8 341 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 NCF1CA8MVU1 366 aaPredicted RBP5.47□□□□□ -1.53
RNF4-217ENST00000511892 MAGEB17A8MXT2 336 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 TRIM49D1C9J1S8 452 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 FAM227AF5H4B4 570 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 COPEO14579 308 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 KLF11O14901 512 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 PHGDHO43175 533 aaKnown RBP5.47□□□□□ -1.53
RNF4-217ENST00000511892 WISP2O76076 250 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 WDR47O94967 919 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 CLDN1O95832 211 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 LDLRP01130 860 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 SERPIND1P05546 499 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 FHP07954 510 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 VIMP08670 466 aaKnown RBP5.47□□□□□ -1.53
RNF4-217ENST00000511892 DHRS4L1P0CG22 281 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 CCDC166P0CW27 439 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 C1GALT1C1LP0DN25 315 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 ICAM2P13598 275 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 NCF1P14598 390 aaPredicted RBP5.47□□□□□ -1.53
RNF4-217ENST00000511892 ALOX12P18054 663 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 KRT4P19013 534 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 GNAZP19086 355 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 IL10P22301 178 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 SPRP35270 261 aaPredicted RBP5.47□□□□□ -1.53
RNF4-217ENST00000511892 HNF4AP41235 474 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 ST13P50502 369 aaKnown RBP5.47□□□□□ -1.53
RNF4-217ENST00000511892 SEC24CP53992 1094 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 RAB8AP61006 207 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 ARG2P78540 354 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 BTG2P78543 158 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 SRSF11Q05519 484 aaKnown RBP5.47□□□□□ -1.53
RNF4-217ENST00000511892 RGS1Q08116 209 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 DLG1Q12959 904 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 CDC16Q13042 620 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 RUNX2Q13950 521 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 USP10Q14694 798 aaKnown RBP5.47□□□□□ -1.53
RNF4-217ENST00000511892 ABRAXAS2Q15018 415 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 RBBP5Q15291 538 aaKnown RBP5.47□□□□□ -1.53
RNF4-217ENST00000511892 TGFBIQ15582 683 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 ZKSCAN8Q15776 578 aaPredicted RBP5.47□□□□□ -1.53
RNF4-217ENST00000511892 SFT2D3Q587I9 215 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 FBXO48Q5FWF7 155 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 ZNF324BQ6AW86 544 aaPredicted RBP5.47□□□□□ -1.53
RNF4-217ENST00000511892 FCRLBQ6BAA4 426 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 SH2D5Q6ZV89 423 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 VN1R5Q7Z5H4 357 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 TMPRSS11BQ86T26 416 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 ADAMTSL2Q86TH1 951 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.47□□□□□ -1.533e-6■■■■■ 69.6
RNF4-217ENST00000511892 LRRC34Q8IZ02 419 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 BEST3Q8N1M1 668 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 GBP7Q8N8V2 638 aaPredicted RBP5.47□□□□□ -1.53
RNF4-217ENST00000511892 LRRC8CQ8TDW0 803 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 FAR1Q8WVX9 515 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 METTL21AQ8WXB1 218 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 ISL2Q96A47 359 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 TBC1D20Q96BZ9 403 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 SEC16BQ96JE7 1060 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 OR1F2PQ96R84 312 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 RBBP8Q99708 897 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 EGFL8Q99944 293 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 SLX1AQ9BQ83 275 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 AIF1LQ9BQI0 150 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 IQCGQ9H095 443 aaKnown RBP5.47□□□□□ -1.53
RNF4-217ENST00000511892 RNF32Q9H0A6 362 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 AGPAT4Q9NRZ5 378 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 COPG2Q9UBF2 871 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 C19orf25Q9UFG5 118 aaPredicted RBP5.47□□□□□ -1.53
RNF4-217ENST00000511892 MID2Q9UJV3 735 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 DYRK1BQ9Y463 629 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 ASB1Q9Y576 335 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 KCNE2Q9Y6J6 123 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 EXPH5Q8NEV8 1989 aa5.47□□□□□ -1.53
RNF4-217ENST00000511892 PKDREJQ9NTG1 2253 aa5.46□□□□□ -1.53
RNF4-217ENST00000511892 IGKV3D-11A0A0A0MRZ8 115 aa5.46□□□□□ -1.54
RNF4-217ENST00000511892 TRAV17A0A0B4J275 112 aa5.46□□□□□ -1.54
RNF4-217ENST00000511892 DYTNA2CJ06 578 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms