RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 HEATR5AQ86XA9 2040 aa10.69□□□□□ -0.7
RNF4-216ENST00000511859 NCKAP5O14513 1909 aa10.69□□□□□ -0.7
RNF4-216ENST00000511859 URADA6NGE7 173 aa10.68□□□□□ -0.7
RNF4-216ENST00000511859 G3V3Y1 287 aa10.68□□□□□ -0.7
RNF4-216ENST00000511859 CLDN4O14493 209 aa10.68□□□□□ -0.7
RNF4-216ENST00000511859 CASKO14936 926 aa10.68□□□□□ -0.7
RNF4-216ENST00000511859 PRKNO60260 465 aaPredicted RBP10.68□□□□□ -0.7
RNF4-216ENST00000511859 P04436 131 aa10.68□□□□□ -0.7
RNF4-216ENST00000511859 ENO3P13929 434 aaPredicted RBP10.68□□□□□ -0.7
RNF4-216ENST00000511859 CLCN7P51798 805 aa10.68□□□□□ -0.7
RNF4-216ENST00000511859 TBPL1P62380 186 aa10.68□□□□□ -0.7
RNF4-216ENST00000511859 RGS1Q08116 209 aa10.68□□□□□ -0.7
RNF4-216ENST00000511859 POU4F3Q15319 338 aa10.68□□□□□ -0.7
RNF4-216ENST00000511859 PHKG1Q16816 387 aa10.68□□□□□ -0.7
RNF4-216ENST00000511859 CYHR1Q6ZMK1 362 aa10.68□□□□□ -0.7
RNF4-216ENST00000511859 STRA8Q7Z7C7 330 aa10.68□□□□□ -0.7
RNF4-216ENST00000511859 PRELID2Q8N945 189 aa10.68□□□□□ -0.7
RNF4-216ENST00000511859 ALG3Q92685 438 aa10.68□□□□□ -0.7
RNF4-216ENST00000511859 ISL2Q96A47 359 aa10.68□□□□□ -0.7
RNF4-216ENST00000511859 SCYL1Q96KG9 808 aa10.68□□□□□ -0.7
RNF4-216ENST00000511859 EPB41L4BQ9H329 900 aa10.68□□□□□ -0.7
RNF4-216ENST00000511859 LIN28AQ9H9Z2 209 aaKnown RBP10.68□□□□□ -0.7
RNF4-216ENST00000511859 QPCTLQ9NXS2 382 aa10.68□□□□□ -0.7
RNF4-216ENST00000511859 TUBA8Q9NY65 449 aaPredicted RBP10.68□□□□□ -0.7
RNF4-216ENST00000511859 EIF3LQ9Y262 564 aaKnown RBP10.68□□□□□ -0.7
RNF4-216ENST00000511859 USF3Q68DE3 2245 aa10.68□□□□□ -0.7
RNF4-216ENST00000511859 SYNDIG1LA6NDD5 238 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 TRIM64A6NGJ6 449 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 TRIM64BA6NI03 449 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 WWP2O00308 870 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 OR1F1O43749 312 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 ZNF888P0CJ79 500 aaPredicted RBP10.67□□□□□ -0.7
RNF4-216ENST00000511859 FPR1P21462 350 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 OPRM1P35372 400 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 DNASE1L1P49184 302 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 CCR8P51685 355 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 ZNF136P52737 540 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 GNG11P61952 73 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 TBL3Q12788 808 aaKnown RBP10.67□□□□□ -0.7
RNF4-216ENST00000511859 SIX1Q15475 284 aaPredicted RBP10.67□□□□□ -0.7
RNF4-216ENST00000511859 OPN5Q6U736 354 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 LCTLQ6UWM7 567 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 HSDL2Q6YN16 418 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 UBE2R2Q712K3 238 aaPredicted RBP10.67□□□□□ -0.7
RNF4-216ENST00000511859 TMEM132CQ8N3T6 1108 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 TBC1D19Q8N5T2 526 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 UBL4BQ8N7F7 174 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 ABHD11Q8NFV4 315 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 OR4K1Q8NGD4 311 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 NEIL3Q8TAT5 605 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 SLC35B2Q8TB61 432 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 NT5CQ8TCD5 201 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 UTP15Q8TED0 518 aaKnown RBP10.67□□□□□ -0.7
RNF4-216ENST00000511859 HSPBAP1Q96EW2 488 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 HES6Q96HZ4 224 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 CAPZA3Q96KX2 299 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 IL22Q9GZX6 179 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 JKAMPQ9P055 326 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 VPS9D1Q9Y2B5 631 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 ATG4BQ9Y4P1 393 aa10.67□□□□□ -0.7
RNF4-216ENST00000511859 MIF4GDA9UHW6 222 aaKnown RBP10.66□□□□□ -0.7
RNF4-216ENST00000511859 AP3B1O00203 1094 aa10.66□□□□□ -0.7
RNF4-216ENST00000511859 VAPBO95292 243 aa10.66□□□□□ -0.7
RNF4-216ENST00000511859 IL18BPO95998 194 aa10.66□□□□□ -0.7
RNF4-216ENST00000511859 B3GALT4O96024 378 aa10.66□□□□□ -0.7
RNF4-216ENST00000511859 F12P00748 615 aaPredicted RBP10.66□□□□□ -0.7
RNF4-216ENST00000511859 SERPIND1P05546 499 aa10.66□□□□□ -0.7
RNF4-216ENST00000511859 SMIM10L1P0DMW3 83 aa10.66□□□□□ -0.7
RNF4-216ENST00000511859 CDH1P12830 882 aa10.66□□□□□ -0.7
RNF4-216ENST00000511859 NPPBP16860 134 aa10.66□□□□□ -0.7
RNF4-216ENST00000511859 CTSSP25774 331 aa10.66□□□□□ -0.7
RNF4-216ENST00000511859 NMBRP28336 390 aa10.66□□□□□ -0.7
RNF4-216ENST00000511859 CXCR5P32302 372 aa10.66□□□□□ -0.7
RNF4-216ENST00000511859 HSD17B7P56937 341 aa10.66□□□□□ -0.7
RNF4-216ENST00000511859 BMPR2Q13873 1038 aa10.66□□□□□ -0.7
RNF4-216ENST00000511859 ACSF3Q4G176 576 aaPredicted RBP10.66□□□□□ -0.7
RNF4-216ENST00000511859 SLC22A10Q63ZE4 541 aa10.66□□□□□ -0.7
RNF4-216ENST00000511859 KIAA0930Q6ICG6 404 aaPredicted RBP10.66□□□□□ -0.7
RNF4-216ENST00000511859 PM20D2Q8IYS1 436 aa10.66□□□□□ -0.7
RNF4-216ENST00000511859 LIX1Q8N485 282 aa10.66□□□□□ -0.7
RNF4-216ENST00000511859 GPATCH11Q8N954 259 aa10.66□□□□□ -0.7
RNF4-216ENST00000511859 OR5L2Q8NGL0 311 aa10.66□□□□□ -0.7
RNF4-216ENST00000511859 OR8K3Q8NH51 312 aa10.66□□□□□ -0.7
RNF4-216ENST00000511859 SMIM10Q96HG1 83 aa10.66□□□□□ -0.7
RNF4-216ENST00000511859 C16orf45Q96MC5 204 aaPredicted RBP10.66□□□□□ -0.7
RNF4-216ENST00000511859 HAUS8Q9BT25 410 aa10.66□□□□□ -0.7
RNF4-216ENST00000511859 RHBGQ9H310 441 aa10.66□□□□□ -0.7
RNF4-216ENST00000511859 ADAP2Q9NPF8 381 aa10.66□□□□□ -0.7
RNF4-216ENST00000511859 SEMA4BQ9NPR2 832 aaPredicted RBP10.66□□□□□ -0.7
RNF4-216ENST00000511859 ZFP69BQ9UJL9 534 aa10.66□□□□□ -0.7
RNF4-216ENST00000511859 SH2B3Q9UQQ2 575 aa10.66□□□□□ -0.7
RNF4-216ENST00000511859 TRBC2A0A5B9 178 aa10.65□□□□□ -0.7
RNF4-216ENST00000511859 SH3D21A4FU49 640 aa10.65□□□□□ -0.7
RNF4-216ENST00000511859 MBD3L4A6NDZ8 208 aaPredicted RBP10.65□□□□□ -0.7
RNF4-216ENST00000511859 MBD3L5A6NJ08 208 aaPredicted RBP10.65□□□□□ -0.7
RNF4-216ENST00000511859 CNOT4O95628 575 aaKnown RBP10.65□□□□□ -0.7
RNF4-216ENST00000511859 APRTP07741 180 aa10.65□□□□□ -0.7
RNF4-216ENST00000511859 CCL3P10147 92 aa10.65□□□□□ -0.7
RNF4-216ENST00000511859 OGNP20774 298 aaKnown RBP10.65□□□□□ -0.7
RNF4-216ENST00000511859 ARNTP27540 789 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms