RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 A0A088AWK7 358 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 TRAV17A0A0B4J275 112 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 ANKUB1A6NFN9 424 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 CYSRT1A8MQ03 144 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 FOXO6A8MYZ6 492 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 AGFG2O95081 481 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 ABHD2P08910 425 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 SNRPAP09012 282 aaKnown RBP12.43□□□□□ -0.42
RNF4-215ENST00000511843 SBK3P0C264 359 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 ZNF10P21506 573 aaPredicted RBP12.43□□□□□ -0.42
RNF4-215ENST00000511843 CNTFP26441 200 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 SSR2P43308 183 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 NEK2P51955 445 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 RPS13P62277 151 aaKnown RBP12.43□□□□□ -0.42
RNF4-215ENST00000511843 ID2Q02363 134 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 PCDH1Q08174 1060 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 TUBA3CQ13748 450 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 SLC29A2Q14542 456 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 FHL5Q5TD97 284 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 ZNF468Q5VIY5 522 aaPredicted RBP12.43□□□□□ -0.42
RNF4-215ENST00000511843 KHDRBS2Q5VWX1 349 aaKnown RBP12.43□□□□□ -0.42
RNF4-215ENST00000511843 TUBA3EQ6PEY2 450 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 FAM180AQ6UWF9 173 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 TRMT10CQ7L0Y3 403 aaKnown RBP12.43□□□□□ -0.42
RNF4-215ENST00000511843 ACOT4Q8N9L9 421 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 OR52B6Q8NGF0 335 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 ELP5Q8TE02 316 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 THAP3Q8WTV1 239 aaPredicted RBP12.43□□□□□ -0.42
RNF4-215ENST00000511843 FAR1Q8WVX9 515 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 UBE2E3Q969T4 207 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 ZNF354BQ96LW1 612 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 KCNC2Q96PR1 638 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 KLHL1Q9NR64 748 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 AGPAT4Q9NRZ5 378 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 TEKT2Q9UIF3 430 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 PCTPQ9UKL6 214 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 FBXW2Q9UKT8 454 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 MMACHCQ9Y4U1 282 aa12.43□□□□□ -0.42
RNF4-215ENST00000511843 TRBV11-1A0A0K0K1C0 115 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 A0A1B0GTL3 188 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 CCDC189A1A4V9 331 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 BLACEA4D250 179 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 GABRR3A8MPY1 467 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 GOLGA8RI6L899 631 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 PLPP1O14494 284 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 PRAMEF2O60811 474 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 LDB3O75112 727 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 PRKRAO75569 313 aaKnown RBP12.42□□□□□ -0.42
RNF4-215ENST00000511843 WISP2O76076 250 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 ETHE1O95571 254 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 RBP1P09455 135 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 TSPAN8P19075 237 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 HIST1H1TP22492 207 aaPredicted RBP12.42□□□□□ -0.42
RNF4-215ENST00000511843 HPDP32754 393 aaPredicted RBP12.42□□□□□ -0.42
RNF4-215ENST00000511843 CD96P40200 585 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 RAP1GDS1P52306 607 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 HSD17B7P56937 341 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 TAS2R50P59544 299 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 TGM3Q08188 693 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 ZRSR2Q15696 482 aaKnown RBP12.42□□□□□ -0.42
RNF4-215ENST00000511843 MEP1AQ16819 746 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 TSNAXIP1Q2TAA8 658 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 TMEM35AQ53FP2 167 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 DEPDC1Q5TB30 811 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 LIPJQ5W064 366 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 ADGRD1Q6QNK2 874 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 CHSY3Q70JA7 882 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 TMEM151AQ8N4L1 468 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 SLC5A8Q8N695 610 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 MDS2Q8NDY4 140 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 ARMC2Q8NEN0 867 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 MTFMTQ96DP5 389 aaKnown RBP12.42□□□□□ -0.42
RNF4-215ENST00000511843 CMTM7Q96FZ5 175 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 TBCDQ9BTW9 1192 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 RNF32Q9H0A6 362 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 ZBTB26Q9HCK0 441 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 SEMA4BQ9NPR2 832 aaPredicted RBP12.42□□□□□ -0.42
RNF4-215ENST00000511843 TMEM216Q9P0N5 145 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 TBK1Q9UHD2 729 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 ZNF223Q9UK11 482 aaPredicted RBP12.42□□□□□ -0.42
RNF4-215ENST00000511843 TNPO3Q9Y5L0 923 aaKnown RBP12.42□□□□□ -0.42
RNF4-215ENST00000511843 CROCCQ5TZA2 2017 aa12.42□□□□□ -0.42
RNF4-215ENST00000511843 A8MT66 165 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 PPP6CO00743 305 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 CLDN4O14493 209 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 SMIM24O75264 130 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 EEDO75530 441 aaKnown RBP12.41□□□□□ -0.42
RNF4-215ENST00000511843 SHBGP04278 402 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 IFNA16P05015 189 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 COL6A2P12110 1019 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 TPP2P29144 1249 aaPredicted RBP12.41□□□□□ -0.42
RNF4-215ENST00000511843 CCNG1P51959 295 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 HNRNPH2P55795 449 aaKnown RBP12.41□□□□□ -0.42
RNF4-215ENST00000511843 OC90Q02509 493 aaPredicted RBP12.41□□□□□ -0.42
RNF4-215ENST00000511843 TRAF3Q13114 568 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 SLAMF1Q13291 335 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 OR1C1Q15619 314 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 AP5B1Q2VPB7 878 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 ZNF766Q5HY98 468 aa12.41□□□□□ -0.42
RNF4-215ENST00000511843 SPINK14Q6IE38 97 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms