RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 DHX34Q14147 1143 aaKnown RBP12.23□□□□□ -0.45
POLR2J3-216ENST00000511773 HSPB2Q16082 182 aa12.23□□□□□ -0.45
POLR2J3-216ENST00000511773 PHKG1Q16816 387 aa12.23□□□□□ -0.45
POLR2J3-216ENST00000511773 TOR1AIP1Q5JTV8 583 aa12.23□□□□□ -0.45
POLR2J3-216ENST00000511773 SEM1Q6ZVN7 128 aa12.23□□□□□ -0.45
POLR2J3-216ENST00000511773 PALM2Q8IXS6 379 aa12.23□□□□□ -0.45
POLR2J3-216ENST00000511773 ULK2Q8IYT8 1036 aa12.23□□□□□ -0.45
POLR2J3-216ENST00000511773 FAM47BQ8NA70 645 aa12.23□□□□□ -0.45
POLR2J3-216ENST00000511773 OR4K1Q8NGD4 311 aa12.23□□□□□ -0.45
POLR2J3-216ENST00000511773 LINC01560Q8TB33 94 aa12.23□□□□□ -0.45
POLR2J3-216ENST00000511773 EEF1AKMT1Q8WVE0 214 aa12.23□□□□□ -0.45
POLR2J3-216ENST00000511773 KIAA1191Q96A73 305 aa12.23□□□□□ -0.45
POLR2J3-216ENST00000511773 ZNF669Q96BR6 464 aaPredicted RBP12.23□□□□□ -0.45
POLR2J3-216ENST00000511773 SNF8Q96H20 258 aa12.23□□□□□ -0.45
POLR2J3-216ENST00000511773 OR4K3Q96R72 315 aa12.23□□□□□ -0.45
POLR2J3-216ENST00000511773 YIPF4Q9BSR8 244 aa12.23□□□□□ -0.45
POLR2J3-216ENST00000511773 SEMA4BQ9NPR2 832 aaPredicted RBP12.23□□□□□ -0.45
POLR2J3-216ENST00000511773 PRTFDC1Q9NRG1 225 aa12.23□□□□□ -0.45
POLR2J3-216ENST00000511773 SACM1LQ9NTJ5 587 aa12.23□□□□□ -0.45
POLR2J3-216ENST00000511773 TRMT6Q9UJA5 497 aaKnown RBP12.23□□□□□ -0.45
POLR2J3-216ENST00000511773 ZFP69BQ9UJL9 534 aa12.23□□□□□ -0.45
POLR2J3-216ENST00000511773 PPIEQ9UNP9 301 aaKnown RBP12.23□□□□□ -0.45
POLR2J3-216ENST00000511773 NBEAL1Q6ZS30 2694 aa12.23□□□□□ -0.45
POLR2J3-216ENST00000511773 MYOCOSA0A1B0GUC4 107 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 TCRBV7S3A2A0A539 114 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 CLCA1A8K7I4 914 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 H7C1Q1 480 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 SMAD7O15105 426 aaKnown RBP12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 NRDCO43847 1150 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 P04436 131 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 IFNA16P05015 189 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 CCL3P10147 92 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 EPXP11678 715 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 CD53P19397 219 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 HNRNPFP52597 415 aaKnown RBP12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 HK2P52789 917 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 FOXO1Q12778 655 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 CSHL1Q14406 222 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 Q5PR19 223 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 RAD9BQ6WBX8 426 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 HSDL2Q6YN16 418 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 GSTA5Q7RTV2 222 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 STRA8Q7Z7C7 330 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 SLC13A5Q86YT5 568 aaPredicted RBP12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 SCUBE1Q8IWY4 988 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 CIARTQ8N365 385 aaPredicted RBP12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 TMEM52Q8NDY8 209 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 TNIP2Q8NFZ5 429 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 SPATA3Q8NHX4 192 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 NEIL2Q969S2 332 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 HES6Q96HZ4 224 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 NDNQ99608 321 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 TSGA10Q9BZW7 698 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 SLC6A15Q9H2J7 730 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 ADAP2Q9NPF8 381 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 BEX4Q9NWD9 120 aaPredicted RBP12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 ARL15Q9NXU5 204 aa12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 MTRF1LQ9UGC7 380 aaKnown RBP12.22□□□□□ -0.45
POLR2J3-216ENST00000511773 ARID1AO14497 2285 aa12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 PABPN1LA6NDY0 278 aaKnown RBP12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 URADA6NGE7 173 aa12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 KDM4EB2RXH2 506 aaPredicted RBP12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 HCN1O60741 890 aa12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 HIST1H2AGP0C0S8 130 aaPredicted RBP12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 HIST1H2ADP20671 130 aa12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 SAT1P21673 171 aa12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 AHRP35869 848 aa12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 PIGAP37287 484 aa12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 CCZ1BP86790 482 aa12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 CCZ1P86791 482 aaPredicted RBP12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 SP140Q13342 867 aa12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 RUNX2Q13950 521 aa12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 RBBP5Q15291 538 aaKnown RBP12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 SHEQ5VZ18 495 aa12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 MYO1HQ8N1T3 1032 aa12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 ZNF321PQ8N8H1 164 aa12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 ANKRD53Q8N9V6 530 aa12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 GOLM1Q8NBJ4 401 aa12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 COX4I2Q96KJ9 171 aa12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 HIST1H2AHQ96KK5 128 aa12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 HIST1H2AJQ99878 128 aa12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 H2AFJQ9BTM1 129 aa12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 OR8D2Q9GZM6 311 aa12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 CLK4Q9HAZ1 481 aaKnown RBP12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 ATG4BQ9Y4P1 393 aa12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 CLCA3PQ9Y6N3 262 aa12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.21□□□□□ -0.45
POLR2J3-216ENST00000511773 KIAA1549Q9HCM3 1950 aa12.2□□□□□ -0.46
POLR2J3-216ENST00000511773 EEF1E1-BLOC1S5C9J1V9 151 aa12.2□□□□□ -0.46
POLR2J3-216ENST00000511773 INAFM1C9JVW0 142 aa12.2□□□□□ -0.46
POLR2J3-216ENST00000511773 EIF3FO00303 357 aaPredicted RBP12.2□□□□□ -0.46
POLR2J3-216ENST00000511773 CLDN4O14493 209 aa12.2□□□□□ -0.46
POLR2J3-216ENST00000511773 EEF1E1O43324 174 aaKnown RBP12.2□□□□□ -0.46
POLR2J3-216ENST00000511773 ZNF354AO60765 605 aaPredicted RBP12.2□□□□□ -0.46
POLR2J3-216ENST00000511773 HAUS5O94927 633 aa12.2□□□□□ -0.46
POLR2J3-216ENST00000511773 GUCA1CO95843 209 aa12.2□□□□□ -0.46
POLR2J3-216ENST00000511773 RFPL3SP0C7P2 107 aa12.2□□□□□ -0.46
POLR2J3-216ENST00000511773 SMIM10L1P0DMW3 83 aa12.2□□□□□ -0.46
POLR2J3-216ENST00000511773 TPSB2P20231 275 aa12.2□□□□□ -0.46
POLR2J3-216ENST00000511773 TRPC1P48995 793 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms