RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 GALNT11Q8NCW6 608 aa15.12■□□□□ 0.01
PDLIM5-216ENST00000511767 ARMC2Q8NEN0 867 aa15.12■□□□□ 0.01
PDLIM5-216ENST00000511767 RGMAQ96B86 450 aa15.12■□□□□ 0.01
PDLIM5-216ENST00000511767 ZNF354BQ96LW1 612 aa15.12■□□□□ 0.01
PDLIM5-216ENST00000511767 CDK15Q96Q40 435 aa15.12■□□□□ 0.01
PDLIM5-216ENST00000511767 NPAS2Q99743 824 aa15.12■□□□□ 0.01
PDLIM5-216ENST00000511767 MAPKAP1Q9BPZ7 522 aa15.12■□□□□ 0.01
PDLIM5-216ENST00000511767 ILKAPQ9H0C8 392 aaPredicted RBP15.12■□□□□ 0.01
PDLIM5-216ENST00000511767 KCNK13Q9HB14 408 aa15.12■□□□□ 0.01
PDLIM5-216ENST00000511767 LYRM4Q9HD34 91 aa15.12■□□□□ 0.01
PDLIM5-216ENST00000511767 DMRT3Q9NQL9 472 aa15.12■□□□□ 0.01
PDLIM5-216ENST00000511767 ASF1BQ9NVP2 202 aa15.12■□□□□ 0.01
PDLIM5-216ENST00000511767 PSMC3IPQ9P2W1 217 aaPredicted RBP15.12■□□□□ 0.01
PDLIM5-216ENST00000511767 TBK1Q9UHD2 729 aa15.12■□□□□ 0.01
PDLIM5-216ENST00000511767 DCDC2Q9UHG0 476 aa15.12■□□□□ 0.01
PDLIM5-216ENST00000511767 COPG1Q9Y678 874 aaKnown RBP15.12■□□□□ 0.01
PDLIM5-216ENST00000511767 A0A1B0GTL3 188 aa15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 A8MT66 165 aa15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 FOXE1O00358 373 aaPredicted RBP15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 SAP18O00422 153 aaKnown RBP15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 RPS17P08708 135 aaKnown RBP15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 HSD17B3P37058 310 aa15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 TSFMP43897 325 aaKnown RBP15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 GPR143P51810 404 aa15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 ARFIP1P53367 373 aa15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 CDH13P55290 713 aa15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 SLAMF1Q13291 335 aa15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 CUL3Q13618 768 aa15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 DDX39BQ13838 428 aaKnown RBP15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 ZNF169Q14929 603 aaPredicted RBP15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 RASA2Q15283 850 aa15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 UNC50Q53HI1 259 aa15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 ACER2Q5QJU3 275 aa15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 ABHD17BQ5VST6 288 aa15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 RPUSD3Q6P087 351 aaKnown RBP15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 RPS27LQ71UM5 84 aaKnown RBP15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 MILR1Q7Z6M3 343 aa15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 ATCAYQ86WG3 371 aa15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 TDRPQ86YL5 185 aa15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 EFCAB3Q8N7B9 438 aa15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 OR1N1Q8NGS0 311 aa15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 ZNF483Q8TF39 744 aaPredicted RBP15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 REPS1Q96D71 796 aa15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 MTFMTQ96DP5 389 aaKnown RBP15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 SORBS1Q9BX66 1292 aaKnown RBP15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 RNF32Q9H0A6 362 aa15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 NTNG1Q9Y2I2 539 aa15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 SPENQ96T58 3664 aaKnown RBP15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 RELNP78509 3460 aa15.11■□□□□ 0.01
PDLIM5-216ENST00000511767 DYTNA2CJ06 578 aa15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 TCP11X1B4DZS4 312 aa15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 MAN1A2O60476 641 aa15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 ETHE1O95571 254 aa15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 F10P00742 488 aa15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 GSTA1P08263 222 aa15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 IMPDH1P20839 514 aa15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 BSGP35613 385 aa15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 CCNG1P51959 295 aa15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 ARG2P78540 354 aa15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 SRSF1Q07955 248 aaKnown RBP eCLIP15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 TRAF3Q13114 568 aa15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 RCN2Q14257 317 aa15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 FCRLBQ6BAA4 426 aa15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 ADAMTS18Q8TE60 1221 aa15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 UBLCP1Q8WVY7 318 aaPredicted RBP15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 CSF3RQ99062 836 aa15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 ZNF717Q9BY31 904 aaPredicted RBP15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 ALOXE3Q9BYJ1 711 aa15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 COPS7BQ9H9Q2 264 aaPredicted RBP15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 SEMA4BQ9NPR2 832 aaPredicted RBP15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 VTI1BQ9UEU0 232 aa15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 TEKT2Q9UIF3 430 aa15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 ZNF225Q9UK10 706 aa15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 PPT2Q9UMR5 302 aa15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 PPIEQ9UNP9 301 aaKnown RBP15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 MRPS33Q9Y291 106 aaKnown RBP15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 POLEQ07864 2286 aa15.1■□□□□ 0.01
PDLIM5-216ENST00000511767 CLEC18AA5D8T8 446 aa15.09■□□□□ 0.01
PDLIM5-216ENST00000511767 PLPP1O14494 284 aa15.09■□□□□ 0.01
PDLIM5-216ENST00000511767 VPS4BO75351 444 aa15.09■□□□□ 0.01
PDLIM5-216ENST00000511767 CBX6O95503 412 aa15.09■□□□□ 0.01
PDLIM5-216ENST00000511767 TSPAN8P19075 237 aa15.09■□□□□ 0.01
PDLIM5-216ENST00000511767 TAC1P20366 129 aa15.09■□□□□ 0.01
PDLIM5-216ENST00000511767 PPP2R1BP30154 601 aa15.09■□□□□ 0.01
PDLIM5-216ENST00000511767 CD96P40200 585 aa15.09■□□□□ 0.01
PDLIM5-216ENST00000511767 SLCO1A2P46721 670 aa15.09■□□□□ 0.01
PDLIM5-216ENST00000511767 PRKAA2P54646 552 aa15.09■□□□□ 0.01
PDLIM5-216ENST00000511767 VSNL1P62760 191 aa15.09■□□□□ 0.01
PDLIM5-216ENST00000511767 CLCQ05315 142 aa15.09■□□□□ 0.01
PDLIM5-216ENST00000511767 ZNF33BQ06732 778 aa15.09■□□□□ 0.01
PDLIM5-216ENST00000511767 SLC13A2Q13183 592 aa15.09■□□□□ 0.01
PDLIM5-216ENST00000511767 MEP1AQ16819 746 aa15.09■□□□□ 0.01
PDLIM5-216ENST00000511767 CLEC18BQ6UXF7 455 aa15.09■□□□□ 0.01
PDLIM5-216ENST00000511767 RPS19BP1Q86WX3 136 aaKnown RBP15.09■□□□□ 0.01
PDLIM5-216ENST00000511767 CRLF3Q8IUI8 442 aa15.09■□□□□ 0.01
PDLIM5-216ENST00000511767 ZCCHC7Q8N3Z6 543 aaKnown RBP15.09■□□□□ 0.01
PDLIM5-216ENST00000511767 KIF2BQ8N4N8 673 aa15.09■□□□□ 0.01
PDLIM5-216ENST00000511767 FAM47BQ8NA70 645 aa15.09■□□□□ 0.01
PDLIM5-216ENST00000511767 CLEC18CQ8NCF0 446 aa15.09■□□□□ 0.01
PDLIM5-216ENST00000511767 OR4F6Q8NGB9 312 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms