RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 ITGB2P05107 769 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 ZCCHC18P0CG32 403 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 HSD17B1P14061 328 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 DRD2P14416 443 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 HOXB6P17509 224 aaKnown RBP8.66□□□□□ -1.02
NR1I3-228ENST00000511676 POLR2CP19387 275 aaPredicted RBP8.66□□□□□ -1.02
NR1I3-228ENST00000511676 PPIBP23284 216 aaKnown RBP8.66□□□□□ -1.02
NR1I3-228ENST00000511676 CD82P27701 267 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 MAGEA8P43361 318 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 PRSS12P56730 875 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 EEFSECP57772 596 aaKnown RBP8.66□□□□□ -1.02
NR1I3-228ENST00000511676 PSME3P61289 254 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 SLC25A3Q00325 362 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 MEF2AQ02078 507 aaPredicted RBP8.66□□□□□ -1.02
NR1I3-228ENST00000511676 KLC1Q07866 573 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 TRAP1Q12931 704 aaKnown RBP8.66□□□□□ -1.02
NR1I3-228ENST00000511676 BNIP2Q12982 314 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 NFYCQ13952 458 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 SPIDRQ14159 915 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 MAPKAPK3Q16644 382 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 FAM174BQ3ZCQ3 159 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 PIGGQ5H8A4 983 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 CDCP2Q5VXM1 449 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 OR4C11Q6IEV9 310 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 FAM71E1Q6IPT2 247 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 TRIM40Q6P9F5 258 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 CYB5D1Q6P9G0 228 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 LAYNQ6UX15 382 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 ASPGQ86U10 573 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 RETREG3Q86VR2 466 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 TMEM132CQ8N3T6 1108 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 C2orf73Q8N5S3 287 aaPredicted RBP8.66□□□□□ -1.02
NR1I3-228ENST00000511676 FAM13CQ8NE31 585 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 OR10G6Q8NH81 332 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 FBXO27Q8NI29 283 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 GTF2H4Q92759 462 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 LRRC58Q96CX6 371 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 MS4A6EQ96DS6 147 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 ASB9Q96DX5 294 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 TCTN2Q96GX1 697 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 CCDC115Q96NT0 180 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 SLC46A1Q96NT5 459 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 TSSK3Q96PN8 268 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 OR2A5Q96R48 311 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 KCNK17Q96T54 332 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 SLC38A3Q99624 504 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 THTPAQ9BU02 230 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 ZNF717Q9BY31 904 aaPredicted RBP8.66□□□□□ -1.02
NR1I3-228ENST00000511676 REEP4Q9H6H4 257 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 BTNL2Q9UIR0 455 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 ZFYVE26Q68DK2 2539 aa8.66□□□□□ -1.02
NR1I3-228ENST00000511676 SPEGQ15772 3267 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 ANKRD12Q6UB98 2062 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 TRBV5-3A0A0A0MS03 114 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 A0A0A6YYD5 115 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 PRSS51A0A1B0GVH4 220 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 EME2A4GXA9 379 aaPredicted RBP8.65□□□□□ -1.02
NR1I3-228ENST00000511676 ANKRD65E5RJM6 399 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 PPM1DO15297 605 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 DUX1O43812 170 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 LCMT2O60294 686 aaKnown RBP8.65□□□□□ -1.02
NR1I3-228ENST00000511676 CSO75390 466 aaKnown RBP8.65□□□□□ -1.02
NR1I3-228ENST00000511676 C9P02748 559 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 NTRK1P04629 796 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 IFI6P09912 130 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 FURINP09958 794 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 GIMD1P0DJR0 217 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 COX7A2P14406 83 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 DDCP20711 480 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 MAGP20916 626 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 HIST1H1TP22492 207 aaPredicted RBP8.65□□□□□ -1.02
NR1I3-228ENST00000511676 ME2P23368 584 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 TACR1P25103 407 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 TPP2P29144 1249 aaPredicted RBP8.65□□□□□ -1.02
NR1I3-228ENST00000511676 HNRNPH1P31943 449 aaKnown RBP8.65□□□□□ -1.02
NR1I3-228ENST00000511676 SSR2P43308 183 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 MAPK12P53778 367 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 MAZP56270 477 aaKnown RBP8.65□□□□□ -1.02
NR1I3-228ENST00000511676 ACTR3P61158 418 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 HYAL2Q12891 473 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 SHBQ15464 509 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 FXNQ16595 210 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 UGT8Q16880 541 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 ISXQ2M1V0 245 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 DEFB133Q30KQ1 61 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 SPANXN4Q5MJ08 99 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 CCNYL2Q5T2Q4 361 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 GARNL3Q5VVW2 1013 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 FCRL6Q6DN72 434 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 MRM1Q6IN84 353 aaKnown RBP8.65□□□□□ -1.02
NR1I3-228ENST00000511676 ADNP2Q6IQ32 1131 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 ABHD17CQ6PCB6 329 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 WDR74Q6RFH5 385 aaPredicted RBP8.65□□□□□ -1.02
NR1I3-228ENST00000511676 ABHD13Q7L211 337 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 PRSS42Q7Z5A4 293 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 VN1R4Q7Z5H5 301 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 DHDDSQ86SQ9 333 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 PLXDC1Q8IUK5 500 aa8.65□□□□□ -1.02
NR1I3-228ENST00000511676 SAMD14Q8IZD0 417 aaPredicted RBP8.65□□□□□ -1.02
NR1I3-228ENST00000511676 SLC25A45Q8N413 288 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms