RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 NOVP48745 357 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 ARRB1P49407 418 aaPredicted RBP3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 HOXA1P49639 335 aaPredicted RBP3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 MMP15P51511 669 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 KRTAP10-5P60370 271 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 KRT83P78385 493 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 ACCSLQ4AC99 568 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 CBWD6Q4V339 395 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 CBWD3Q5JTY5 395 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 SIRPB2Q5JXA9 342 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 ALS2CLQ60I27 953 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 TPGS2Q68CL5 300 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 SLC30A6Q6NXT4 461 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 RPUSD3Q6P087 351 aaKnown RBP3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 TEX38Q6PEX7 206 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 DENND5BQ6ZUT9 1274 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 PIWIL4Q7Z3Z4 852 aaKnown RBP3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 SMIM29Q86T20 159 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 NFE4Q86UQ8 179 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 PTOV1Q86YD1 416 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 FAM9BQ8IZU0 186 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 METTL27Q8N6F8 245 aaPredicted RBP3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 KCTD6Q8NC69 237 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 OR10S1Q8NGN2 331 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 OR13A1Q8NGR1 328 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 TMEM158Q8WZ71 300 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 PTERQ96BW5 349 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 ARSGQ96EG1 525 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 ATXN7L3BQ96GX2 97 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 DGAT2Q96PD7 388 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 OR6C1Q96RD1 312 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 SLX1AQ9BQ83 275 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 CCDC106Q9BWC9 280 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 GPR174Q9BXC1 333 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 SLA2Q9H6Q3 261 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 TRPC7Q9HCX4 862 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 TM9SF3Q9HD45 589 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 ZFP57Q9NU63 452 aa3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 DUS2Q9NX74 493 aaKnown RBP3.28□□□□□ -1.88
TOPBP1-208ENST00000511439 ESPL1Q14674 2120 aa3.28□□□□□ -1.89
TOPBP1-208ENST00000511439 ANK2Q01484 3957 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 IGLV5-45A0A087WSX0 123 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 TEX13DA0A0J9YY54 714 aaPredicted RBP3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 ANTXRLA6NF34 631 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 SERINC4A6NH21 518 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 UBE2CO00762 179 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 TRAPPC3O43617 180 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 GPR137BO60478 399 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 CRYAAP02489 173 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 GP1BAP07359 652 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 KRT19P08727 400 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 GOLGA8HP0CJ92 632 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 GABRR2P28476 465 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 CDC25CP30307 473 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 OXTRP30559 389 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 OPRD1P41143 372 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 TNFSF9P41273 254 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 QARSP47897 775 aaKnown RBP3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 CDH13P55290 713 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 ARPP19P56211 112 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 RPL10AP62906 217 aaKnown RBP3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 CDK3Q00526 305 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 PRPF4BQ13523 1007 aaKnown RBP3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 SNTB1Q13884 538 aaKnown RBP3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 MTF1Q14872 753 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 NR1D2Q14995 579 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 SNAPC1Q16533 368 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 PDLIM3Q53GG5 364 aaPredicted RBP3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 C9orf152Q5JTZ5 239 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 GCNT6Q5T4J0 391 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 ERMARDQ5T6L9 678 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 SFMBT2Q5VUG0 894 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 PACS1Q6VY07 963 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 GDPD4Q6W3E5 623 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 ZNF410Q86VK4 478 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 CMTM8Q8IZV2 173 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 CIARTQ8N365 385 aaPredicted RBP3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 FBXO39Q8N4B4 442 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 PAPD5Q8NDF8 572 aaKnown RBP3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 TSPAN14Q8NG11 270 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 APOBEC4Q8WW27 367 aaKnown RBP3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 SEMA4DQ92854 862 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 FAM81BQ96LP2 452 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 C17orf77Q96MU5 243 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 ZNF583Q96ND8 569 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 ZNF582Q96NG8 517 aaPredicted RBP3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 HHATLQ9HCP6 504 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 CHST11Q9NPF2 352 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 ZDHHC4Q9NPG8 344 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 TCF7L2Q9NQB0 619 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 HAO2Q9NYQ3 351 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 NPAP1Q9NZP6 1156 aa3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 KLF2Q9Y5W3 355 aaPredicted RBP3.27□□□□□ -1.89
TOPBP1-208ENST00000511439 NSD1Q96L73 2696 aaPredicted RBP3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 ZNF106Q9H2Y7 1883 aaKnown RBP3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 ARID2Q68CP9 1835 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 NBEAL2Q6ZNJ1 2754 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 TLN2Q9Y4G6 2542 aa3.26□□□□□ -1.89
TOPBP1-208ENST00000511439 IGKV6D-21A0A0A0MT36 114 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms