RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 RND1Q92730 232 aa14.76□□□□□ -0.05
RAB40C-202ENST00000509637 GAL3ST3Q96A11 431 aa14.76□□□□□ -0.05
RAB40C-202ENST00000509637 SCYL1Q96KG9 808 aa14.76□□□□□ -0.05
RAB40C-202ENST00000509637 CAPZA3Q96KX2 299 aa14.76□□□□□ -0.05
RAB40C-202ENST00000509637 TRIM54Q9BYV2 358 aa14.76□□□□□ -0.05
RAB40C-202ENST00000509637 TTTY12Q9BZ98 90 aa14.76□□□□□ -0.05
RAB40C-202ENST00000509637 PRDM7Q9NQW5 492 aa14.76□□□□□ -0.05
RAB40C-202ENST00000509637 TRMT1Q9NXH9 659 aaKnown RBP14.76□□□□□ -0.05
RAB40C-202ENST00000509637 COQ3Q9NZJ6 369 aa14.76□□□□□ -0.05
RAB40C-202ENST00000509637 MYOTQ9UBF9 498 aa14.76□□□□□ -0.05
RAB40C-202ENST00000509637 YARS2Q9Y2Z4 477 aaKnown RBP14.76□□□□□ -0.05
RAB40C-202ENST00000509637 DYRK1BQ9Y463 629 aa14.76□□□□□ -0.05
RAB40C-202ENST00000509637 JRKLQ9Y4A0 524 aa14.76□□□□□ -0.05
RAB40C-202ENST00000509637 ZNF469Q96JG9 3925 aaPredicted RBP14.75□□□□□ -0.05
RAB40C-202ENST00000509637 ZFAND5O76080 213 aa14.75□□□□□ -0.05
RAB40C-202ENST00000509637 ETHE1O95571 254 aa14.75□□□□□ -0.05
RAB40C-202ENST00000509637 GLI4P10075 376 aa14.75□□□□□ -0.05
RAB40C-202ENST00000509637 ENDOUP21128 410 aaKnown RBP14.75□□□□□ -0.05
RAB40C-202ENST00000509637 SAT1P21673 171 aa14.75□□□□□ -0.05
RAB40C-202ENST00000509637 CERS1P27544 350 aa14.75□□□□□ -0.05
RAB40C-202ENST00000509637 CHRNB4P30926 498 aa14.75□□□□□ -0.05
RAB40C-202ENST00000509637 PLA2G16P53816 162 aa14.75□□□□□ -0.05
RAB40C-202ENST00000509637 LIM2P55344 173 aa14.75□□□□□ -0.05
RAB40C-202ENST00000509637 ID2Q02363 134 aa14.75□□□□□ -0.05
RAB40C-202ENST00000509637 TERF2Q15554 542 aa14.75□□□□□ -0.05
RAB40C-202ENST00000509637 ARHGAP11AQ6P4F7 1023 aa14.75□□□□□ -0.05
RAB40C-202ENST00000509637 ABHD17CQ6PCB6 329 aa14.75□□□□□ -0.05
RAB40C-202ENST00000509637 LYPD8Q6UX82 237 aa14.75□□□□□ -0.05
RAB40C-202ENST00000509637 DGAT2L6Q6ZPD8 337 aa14.75□□□□□ -0.05
RAB40C-202ENST00000509637 TMEM251Q8N6I4 163 aa14.75□□□□□ -0.05
RAB40C-202ENST00000509637 DOK4Q8TEW6 326 aa14.75□□□□□ -0.05
RAB40C-202ENST00000509637 POM121Q96HA1 1249 aa14.75□□□□□ -0.05
RAB40C-202ENST00000509637 CNPPD1Q9BV87 410 aa14.75□□□□□ -0.05
RAB40C-202ENST00000509637 TP63Q9H3D4 680 aaPredicted RBP14.75□□□□□ -0.05
RAB40C-202ENST00000509637 PROK2Q9HC23 129 aa14.75□□□□□ -0.05
RAB40C-202ENST00000509637 OARD1Q9Y530 152 aa14.75□□□□□ -0.05
RAB40C-202ENST00000509637 KCNE2Q9Y6J6 123 aa14.75□□□□□ -0.05
RAB40C-202ENST00000509637 FREM3P0C091 2139 aa14.75□□□□□ -0.05
RAB40C-202ENST00000509637 NINQ8N4C6 2090 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 A0A0G2JNJ9 132 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 KDM4EB2RXH2 506 aaPredicted RBP14.74□□□□□ -0.05
RAB40C-202ENST00000509637 KLK8O60259 260 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 WDR47O94967 919 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 IGHG3P01860 377 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 TUBB4AP04350 444 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 CCL3P10147 92 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 DNAJA1P31689 397 aaKnown RBP14.74□□□□□ -0.05
RAB40C-202ENST00000509637 MAGEA5P43359 124 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 KCNC1P48547 511 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 DNASE1L1P49184 302 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 IST1P53990 364 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 HSD17B7P56937 341 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 CDKL1Q00532 357 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 PPP1R7Q15435 360 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 TMEM211Q6ICI0 200 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 NIPAL1Q6NVV3 410 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 TMIGD1Q6UXZ0 262 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 ANKMY2Q8IV38 441 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 TBC1D19Q8N5T2 526 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 ASB5Q8WWX0 329 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 ANKRD9Q96BM1 317 aaPredicted RBP14.74□□□□□ -0.05
RAB40C-202ENST00000509637 F2RL3Q96RI0 385 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 TTYH2Q9BSA4 534 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 NPLQ9BXD5 320 aaPredicted RBP14.74□□□□□ -0.05
RAB40C-202ENST00000509637 ADAP2Q9NPF8 381 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 TIMMDC1Q9NPL8 285 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 PPANQ9NQ55 473 aaKnown RBP14.74□□□□□ -0.05
RAB40C-202ENST00000509637 TUBA8Q9NY65 449 aaPredicted RBP14.74□□□□□ -0.05
RAB40C-202ENST00000509637 MOCS1Q9NZB8 636 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 Q9UFV3 132 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 ASIC3Q9UHC3 531 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 DAPP1Q9UN19 280 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 ITPR3Q14573 2671 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 ACANP16112 2415 aa14.74□□□□□ -0.05
RAB40C-202ENST00000509637 A0A1B0GVC2 190 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 FAM95CA0A1B0GW59 222 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 URADA6NGE7 173 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 A8MVJ9 347 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 HRKO00198 91 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 RTCAO00442 366 aaKnown RBP14.73□□□□□ -0.05
RAB40C-202ENST00000509637 LDB3O75112 727 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 ART1P52961 327 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 SKP1P63208 163 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 SLC13A2Q13183 592 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 SEM1Q6ZVN7 128 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 TRILQ7L0X0 811 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 ARMC2Q8NEN0 867 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 OR2L5Q8NG80 312 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 ZNF721Q8TF20 911 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 CCT6BQ92526 530 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 ANKRD7Q92527 254 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 SLCO2A1Q92959 643 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 MAPKAP1Q9BPZ7 522 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 TMUB1Q9BVT8 246 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 ALOXE3Q9BYJ1 711 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 CAB39LQ9H9S4 337 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 KCNJ16Q9NPI9 418 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 ZNF358Q9NW07 568 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 HPF1Q9NWY4 346 aa14.73□□□□□ -0.05
RAB40C-202ENST00000509637 SPRR3Q9UBC9 169 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms