RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 RGS17Q9UGC6 210 aaPredicted RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 SLCO3A1Q9UIG8 710 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 SIX4Q9UIU6 781 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 MID2Q9UJV3 735 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 PPIEQ9UNP9 301 aaKnown RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 RBMX2Q9Y388 322 aaKnown RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 NOC2LQ9Y3T9 749 aaKnown RBP4.32□□□□□ -1.72
NIPBL-206ENST00000509429 CPQQ9Y646 472 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 FKBP7Q9Y680 259 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 KCNE2Q9Y6J6 123 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 SIGLEC1Q9BZZ2 1709 aa4.32□□□□□ -1.72
NIPBL-206ENST00000509429 DIP2CQ9Y2E4 1556 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 NEO1Q92859 1461 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 CDK12Q9NYV4 1490 aaPredicted RBP4.31□□□□□ -1.72
NIPBL-206ENST00000509429 RTL9Q8NET4 1388 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 A0A1B0GUH1 482 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.31□□□□□ -1.72
NIPBL-206ENST00000509429 A0A1W2PPQ1 181 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 SH3PXD2BA1X283 911 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 MGAT4DA6NG13 374 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 CD8B2A6NJW9 211 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 SMIM23A6NLE4 172 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 OR2AT4A6NND4 320 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 BTBD18B2RXH4 712 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 SLC22A2O15244 555 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 CHADO15335 359 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 BCAT2O15382 392 aaPredicted RBP4.31□□□□□ -1.72
NIPBL-206ENST00000509429 PJA2O43164 708 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 KLK10O43240 276 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 GLRA3O75311 464 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 VPS26AO75436 327 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 VAMP5O95183 116 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 ZBTB11O95625 1053 aaPredicted RBP4.31□□□□□ -1.72
NIPBL-206ENST00000509429 ANXA2P07355 339 aaKnown RBP4.31□□□□□ -1.72
NIPBL-206ENST00000509429 CHRM2P08172 466 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 CELA2AP08217 269 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 GUSBP08236 651 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 SPARCP09486 303 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 ANXA4P09525 319 aaPredicted RBP4.31□□□□□ -1.72
NIPBL-206ENST00000509429 LINC00614P0C842 121 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 CD36P16671 472 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 DTYMKP23919 212 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 EDNRBP24530 442 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 CXCR2P25025 360 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 GABRB3P28472 473 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 CRHR1P34998 444 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 SOAT1P35610 550 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 TGFBR2P37173 567 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 MPLP40238 635 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 KCNJ1P48048 391 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 EIF2B2P49770 351 aaKnown RBP4.31□□□□□ -1.72
NIPBL-206ENST00000509429 MEOX2P50222 304 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 JAK3P52333 1124 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 SLC16A1P53985 500 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 UCP2P55851 309 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 PER3P56645 1201 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 TNNC1P63316 161 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 ADAM8P78325 824 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 PSPHP78330 225 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 POU6F2P78424 691 aaPredicted RBP4.31□□□□□ -1.72
NIPBL-206ENST00000509429 IL9RQ01113 521 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 MTAPQ13126 283 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 BAATQ14032 418 aaPredicted RBP4.31□□□□□ -1.72
NIPBL-206ENST00000509429 EMC2Q15006 297 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 ZNHIT3Q15649 155 aaPredicted RBP4.31□□□□□ -1.72
NIPBL-206ENST00000509429 C5orf64Q2M2E5 130 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 NDUFAF6Q330K2 333 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 PDLIM3Q53GG5 364 aaPredicted RBP4.31□□□□□ -1.72
NIPBL-206ENST00000509429 COQ5Q5HYK3 327 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 GPR157Q5UAW9 335 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 GPR107Q5VW38 600 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 SLX4IPQ5VYV7 408 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 RAP1GAP2Q684P5 730 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 ANKS6Q68DC2 871 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 ANKRD26P1Q6NSI1 321 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 METTL7BQ6UX53 244 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 WDR88Q6ZMY6 472 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 ADCK2Q7Z695 626 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 CCDC60Q8IWA6 550 aaPredicted RBP4.31□□□□□ -1.72
NIPBL-206ENST00000509429 C17orf78Q8N4C9 275 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 ANKRD44Q8N8A2 993 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 FADS6Q8N9I5 356 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 SYT14Q8NB59 555 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 CAMKVQ8NCB2 501 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 PAPD5Q8NDF8 572 aaKnown RBP4.31□□□□□ -1.72
NIPBL-206ENST00000509429 OR13C9Q8NGT0 318 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 OR6X1Q8NH79 312 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 C9orf43Q8TAL5 461 aaPredicted RBP4.31□□□□□ -1.72
NIPBL-206ENST00000509429 SUN3Q8TAQ9 357 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 SLC35F5Q8WV83 523 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 KBTBD7Q8WVZ9 684 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 RAB24Q969Q5 203 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 TAMM41Q96BW9 452 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 ECHDC3Q96DC8 303 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 SGTBQ96EQ0 304 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 DTD2Q96FN9 168 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 ZNF668Q96K58 619 aaPredicted RBP4.31□□□□□ -1.72
NIPBL-206ENST00000509429 PACRGQ96M98 296 aaPredicted RBP4.31□□□□□ -1.72
NIPBL-206ENST00000509429 SNX18Q96RF0 628 aa4.31□□□□□ -1.72
NIPBL-206ENST00000509429 PCYT2Q99447 389 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms