RNA–Protein interactions for RNA: ENST00000509420.5

SDHA-210, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-210ENST00000509420 BMPR2Q13873 1038 aa12.42□□□□□ -0.42
SDHA-210ENST00000509420 GRTP1Q5TC63 336 aa12.42□□□□□ -0.42
SDHA-210ENST00000509420 CLNKQ7Z7G1 428 aa12.42□□□□□ -0.42
SDHA-210ENST00000509420 PPM1NQ8N819 430 aa12.42□□□□□ -0.42
SDHA-210ENST00000509420 SUN3Q8TAQ9 357 aa12.42□□□□□ -0.42
SDHA-210ENST00000509420 NCLNQ969V3 563 aa12.42□□□□□ -0.42
SDHA-210ENST00000509420 ANKRD9Q96BM1 317 aaPredicted RBP12.42□□□□□ -0.42
SDHA-210ENST00000509420 NXNL1Q96CM4 212 aa12.42□□□□□ -0.42
SDHA-210ENST00000509420 SERINC2Q96SA4 455 aa12.42□□□□□ -0.42
SDHA-210ENST00000509420 MAPKAP1Q9BPZ7 522 aa12.42□□□□□ -0.42
SDHA-210ENST00000509420 EFCAB11Q9BUY7 163 aa12.42□□□□□ -0.42
SDHA-210ENST00000509420 SORBS1Q9BX66 1292 aaKnown RBP12.42□□□□□ -0.42
SDHA-210ENST00000509420 PRTFDC1Q9NRG1 225 aa12.42□□□□□ -0.42
SDHA-210ENST00000509420 A0A0G2JMM0 328 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 A0A1W2PPB8 328 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 A0A1W2PRS3 328 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 PINLYPA6NC86 204 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 KIR3DP1A8MWS1 328 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 NPIPA5E9PKD4 350 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 C19orf84I3L1E1 186 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 CCL21O00585 134 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 KLK8O60259 260 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 ALDOAP04075 364 aaKnown RBP12.41□□□□□ -0.42
SDHA-210ENST00000509420 CD46P15529 392 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 ATP5A1P25705 553 aaKnown RBP12.41□□□□□ -0.42
SDHA-210ENST00000509420 ECHS1P30084 290 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 PTGER1P34995 402 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 SPRP35270 261 aaPredicted RBP12.41□□□□□ -0.42
SDHA-210ENST00000509420 SLC12A2P55011 1212 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 TAS2R50P59544 299 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 IGLV3-21P80748 117 aaPredicted RBP12.41□□□□□ -0.42
SDHA-210ENST00000509420 SLC7A5Q01650 507 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 OC90Q02509 493 aaPredicted RBP12.41□□□□□ -0.42
SDHA-210ENST00000509420 ART3Q13508 389 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 FAM219BQ5XKK7 198 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 DGAT2L6Q6ZPD8 337 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 LRRC70Q7Z2Q7 622 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 SPPL2CQ8IUH8 684 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 CTAGE3PQ8IX95 158 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 ZNF595Q8IYB9 648 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 KRT78Q8N1N4 520 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 SNX31Q8N9S9 440 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 TMEM178AQ8NBL3 297 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 ACBD4Q8NC06 268 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 OR7G3Q8NG95 312 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 KCTD4Q8WVF5 259 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 CDKL2Q92772 493 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 EXT2Q93063 718 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 PHF12Q96QT6 1004 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 CAPS2Q9BXY5 557 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 LIN28AQ9H9Z2 209 aaKnown RBP12.41□□□□□ -0.42
SDHA-210ENST00000509420 PNO1Q9NRX1 252 aaKnown RBP12.41□□□□□ -0.42
SDHA-210ENST00000509420 PLSCR2Q9NRY7 297 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 NUDT4Q9NZJ9 180 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 CD274Q9NZQ7 290 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 SH3BGRL2Q9UJC5 107 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 RNF112Q9ULX5 631 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 NPIPA1Q9UND3 350 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 KLF2Q9Y5W3 355 aaPredicted RBP12.41□□□□□ -0.42
SDHA-210ENST00000509420 HIVEP1P15822 2718 aa12.41□□□□□ -0.42
SDHA-210ENST00000509420 CCDC168Q8NDH2 2452 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 HRNRQ86YZ3 2850 aaPredicted RBP12.4□□□□□ -0.42
SDHA-210ENST00000509420 DNAJC13O75165 2243 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 PSMD12O00232 456 aaPredicted RBP12.4□□□□□ -0.42
SDHA-210ENST00000509420 ASNA1O43681 348 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 B3GALT2O43825 422 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 CCNT2O60583 730 aaKnown RBP12.4□□□□□ -0.42
SDHA-210ENST00000509420 CTNSO60931 367 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 H2AFYO75367 372 aaKnown RBP12.4□□□□□ -0.42
SDHA-210ENST00000509420 ITGA10O75578 1167 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 RFC3P40938 356 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 MSH2P43246 934 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 MAGEA12P43365 314 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 CYB561P49447 251 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 MTTPP55157 894 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 ALDH6A1Q02252 535 aaKnown RBP12.4□□□□□ -0.42
SDHA-210ENST00000509420 CAV1Q03135 178 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 SLMAPQ14BN4 828 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 ELAVL1Q15717 326 aaKnown RBP12.4□□□□□ -0.42
SDHA-210ENST00000509420 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.4□□□□□ -0.422e-7■□□□□ 8.5
SDHA-210ENST00000509420 CMPK2Q5EBM0 449 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 SP5Q6BEB4 398 aaPredicted RBP12.4□□□□□ -0.42
SDHA-210ENST00000509420 BNC2Q6ZN30 1099 aaPredicted RBP12.4□□□□□ -0.42
SDHA-210ENST00000509420 MRGPRGQ86SM5 289 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 CCDC25Q86WR0 208 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 SULF2Q8IWU5 870 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 MARVELD2Q8N4S9 558 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 ZNF808Q8N4W9 903 aaPredicted RBP12.4□□□□□ -0.42
SDHA-210ENST00000509420 ACOT4Q8N9L9 421 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 ZFP62Q8NB50 900 aaPredicted RBP12.4□□□□□ -0.42
SDHA-210ENST00000509420 CCT6BQ92526 530 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 MARVELD3Q96A59 401 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 VMP1Q96GC9 406 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 DMRTA2Q96SC8 542 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 LRRC1Q9BTT6 524 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 FUT8Q9BYC5 575 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 DEFB126Q9BYW3 111 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 CNOT10Q9H9A5 744 aaKnown RBP12.4□□□□□ -0.42
SDHA-210ENST00000509420 LYRM4Q9HD34 91 aa12.4□□□□□ -0.42
SDHA-210ENST00000509420 ADAP2Q9NPF8 381 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms