RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 ABHD17CQ6PCB6 329 aa10.18□□□□□ -0.78
RNF4-212ENST00000509258 NCCRP1Q6ZVX7 275 aaPredicted RBP10.18□□□□□ -0.78
RNF4-212ENST00000509258 MAATS1Q7Z4T9 603 aa10.18□□□□□ -0.78
RNF4-212ENST00000509258 CLNKQ7Z7G1 428 aa10.18□□□□□ -0.78
RNF4-212ENST00000509258 RPS19BP1Q86WX3 136 aaKnown RBP10.18□□□□□ -0.78
RNF4-212ENST00000509258 SPPL2CQ8IUH8 684 aa10.18□□□□□ -0.78
RNF4-212ENST00000509258 CHERPQ8IWX8 916 aaKnown RBP10.18□□□□□ -0.78
RNF4-212ENST00000509258 ZNF321PQ8N8H1 164 aa10.18□□□□□ -0.78
RNF4-212ENST00000509258 SNX31Q8N9S9 440 aa10.18□□□□□ -0.78
RNF4-212ENST00000509258 FAM47BQ8NA70 645 aa10.18□□□□□ -0.78
RNF4-212ENST00000509258 POGLUT1Q8NBL1 392 aa10.18□□□□□ -0.78
RNF4-212ENST00000509258 APCDD1LQ8NCL9 501 aa10.18□□□□□ -0.78
RNF4-212ENST00000509258 KCTD4Q8WVF5 259 aa10.18□□□□□ -0.78
RNF4-212ENST00000509258 GAL3ST3Q96A11 431 aa10.18□□□□□ -0.78
RNF4-212ENST00000509258 NXNL1Q96CM4 212 aa10.18□□□□□ -0.78
RNF4-212ENST00000509258 MTFMTQ96DP5 389 aaKnown RBP10.18□□□□□ -0.78
RNF4-212ENST00000509258 MRRFQ96E11 262 aaKnown RBP10.18□□□□□ -0.78
RNF4-212ENST00000509258 SORBS1Q9BX66 1292 aaKnown RBP10.18□□□□□ -0.78
RNF4-212ENST00000509258 PRDM9Q9NQV7 894 aa10.18□□□□□ -0.78
RNF4-212ENST00000509258 PRDM7Q9NQW5 492 aa10.18□□□□□ -0.78
RNF4-212ENST00000509258 LRFN1Q9P244 771 aa10.18□□□□□ -0.78
RNF4-212ENST00000509258 MEMO1Q9Y316 297 aa10.18□□□□□ -0.78
RNF4-212ENST00000509258 MTORP42345 2549 aa10.18□□□□□ -0.78
RNF4-212ENST00000509258 HIVEP1P15822 2718 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 TMEM200CA6NKL6 621 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 NPIPA5E9PKD4 350 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 CYR61O00622 381 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 PRRG2O14669 202 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 CCNT2O60583 730 aaKnown RBP10.17□□□□□ -0.78
RNF4-212ENST00000509258 CLEC3AO75596 197 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 STK16O75716 305 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 ZNF24P17028 368 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 HPDP32754 393 aaPredicted RBP10.17□□□□□ -0.78
RNF4-212ENST00000509258 CYB561P49447 251 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 MLF1P58340 268 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 HSF1Q00613 529 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 CHIT1Q13231 466 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 E2F2Q14209 437 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 CDSNQ15517 529 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 MAPKAPK3Q16644 382 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 PDK4Q16654 411 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 XKR6Q5GH73 641 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 GRTP1Q5TC63 336 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 GALNTL5Q7Z4T8 443 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 FGD2Q7Z6J4 655 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 SIAH3Q8IW03 269 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 ZNF295-AS1Q8N0V1 137 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 PLD6Q8N2A8 252 aaKnown RBP10.17□□□□□ -0.78
RNF4-212ENST00000509258 NOA1Q8NC60 698 aaKnown RBP10.17□□□□□ -0.78
RNF4-212ENST00000509258 OR2L5Q8NG80 312 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 ADAMTS18Q8TE60 1221 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 PHF10Q8WUB8 498 aaKnown RBP10.17□□□□□ -0.78
RNF4-212ENST00000509258 CDKL2Q92772 493 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 TSPAN17Q96FV3 270 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 GPR78Q96P69 363 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 MS4A8Q9BY19 250 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 CD244Q9BZW8 370 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 PHACTR1Q9C0D0 580 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 NT5DC2Q9H857 520 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 LIN28AQ9H9Z2 209 aaKnown RBP10.17□□□□□ -0.78
RNF4-212ENST00000509258 NINJ2Q9NZG7 142 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 GPRC5BQ9NZH0 403 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 COQ3Q9NZJ6 369 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 CD274Q9NZQ7 290 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 KCMF1Q9P0J7 381 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 DMGDHQ9UI17 866 aaKnown RBP10.17□□□□□ -0.78
RNF4-212ENST00000509258 RNF112Q9ULX5 631 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 NPIPA1Q9UND3 350 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 UTP11Q9Y3A2 253 aaKnown RBP10.17□□□□□ -0.78
RNF4-212ENST00000509258 HCFC1P51610 2035 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 AKAP9Q99996 3911 aa10.17□□□□□ -0.78
RNF4-212ENST00000509258 SETD2Q9BYW2 2564 aaPredicted RBP10.16□□□□□ -0.78
RNF4-212ENST00000509258 A0A088AWK7 358 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 TRBV11-1A0A0K0K1C0 115 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 SUPT3HB4E1H0 165 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 C19orf84I3L1E1 186 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 SAP18O00422 153 aaKnown RBP10.16□□□□□ -0.78
RNF4-212ENST00000509258 ASNA1O43681 348 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 ZNF354AO60765 605 aaPredicted RBP10.16□□□□□ -0.78
RNF4-212ENST00000509258 KERAO60938 352 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 SUPT3HO75486 399 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 SLC25A12O75746 678 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 MYO1DO94832 1006 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 SP1P08047 785 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 GSTA2P09210 222 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 CAPN3P20807 821 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 ZNF10P21506 573 aaPredicted RBP10.16□□□□□ -0.78
RNF4-212ENST00000509258 ECHS1P30084 290 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 SPRP35270 261 aaPredicted RBP10.16□□□□□ -0.78
RNF4-212ENST00000509258 LIM2P55344 173 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 RAB38P57729 211 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 ATP6V0D1P61421 351 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 STXBP1P61764 594 aaKnown RBP10.16□□□□□ -0.78
RNF4-212ENST00000509258 ID2Q02363 134 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 ILF2Q12905 390 aaKnown RBP10.16□□□□□ -0.78
RNF4-212ENST00000509258 CDKL4Q5MAI5 379 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 MROH9Q5TGP6 573 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.16□□□□□ -0.78
RNF4-212ENST00000509258 ARMC10Q8N2F6 343 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 TCAIMQ8N3R3 496 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms