RNA–Protein interactions for RNA: ENST00000508608.5

CAST-223, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-223ENST00000508608 UBE2E3Q969T4 207 aa12.48□□□□□ -0.41
CAST-223ENST00000508608 TMCO6Q96DC7 493 aa12.48□□□□□ -0.41
CAST-223ENST00000508608 SLC30A2Q9BRI3 323 aa12.48□□□□□ -0.41
CAST-223ENST00000508608 WRAP53Q9BUR4 548 aaKnown RBP12.48□□□□□ -0.41
CAST-223ENST00000508608 NMNAT1Q9HAN9 279 aaPredicted RBP12.48□□□□□ -0.41
CAST-223ENST00000508608 C3orf14Q9HBI5 128 aa12.48□□□□□ -0.41
CAST-223ENST00000508608 KCND3Q9UK17 655 aa12.48□□□□□ -0.41
CAST-223ENST00000508608 RAB23Q9ULC3 237 aa12.48□□□□□ -0.41
CAST-223ENST00000508608 HTTP42858 3142 aa12.48□□□□□ -0.41
CAST-223ENST00000508608 MTCL1Q9Y4B5 1905 aaKnown RBP12.47□□□□□ -0.41
CAST-223ENST00000508608 NEDD8-MDP1E9PL57 170 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 TEX28O15482 410 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 C1orf105O95561 183 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 SPNP16150 400 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 SLC15A1P46059 708 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 CCL23P55773 120 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 TAS2R50P59544 299 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 TMEM115Q12893 351 aaPredicted RBP12.47□□□□□ -0.41
CAST-223ENST00000508608 GANABQ14697 944 aaKnown RBP12.47□□□□□ -0.41
CAST-223ENST00000508608 MEDAGQ5VYS4 303 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 ASTLQ6HA08 431 aaPredicted RBP12.47□□□□□ -0.41
CAST-223ENST00000508608 FRMPD2BQ6IN97 320 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 REEP3Q6NUK4 255 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 GDPGP1Q6ZNW5 385 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 DPPA4Q7L190 304 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 ATCAYQ86WG3 371 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 OR5AK3PQ8NH89 298 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 SETD6Q8TBK2 473 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 OR5M11Q96RB7 305 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 CORO1BQ9BR76 489 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 TAPBPLQ9BX59 468 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 NLNQ9BYT8 704 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 MIEF1Q9NQG6 463 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 ITM2CQ9NQX7 267 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 TAS2R16Q9NYV7 291 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 KLHL3Q9UH77 587 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 POU2F3Q9UKI9 436 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 OGDHLQ9ULD0 1010 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 TMCC3Q9ULS5 477 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 TRAPPC4Q9Y296 219 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 CCDC88CQ9P219 2028 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 BRCA2P51587 3418 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 DSPPQ9NZW4 1301 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 A0A1W2PRU2 124 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 TTC36A6NLP5 189 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 C5orf58C9J3I9 102 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 ARHGAP33O14559 1287 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 KMOO15229 486 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 PQBP1O60828 265 aaKnown RBP12.47□□□□□ -0.41
CAST-223ENST00000508608 LEFTY1O75610 366 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 SCG5P05408 212 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 NPPBP16860 134 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 LAG3P18627 525 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 UQCRC2P22695 453 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 S100A1P23297 94 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 PBLDP30039 288 aaPredicted RBP12.47□□□□□ -0.41
CAST-223ENST00000508608 CNR2P34972 360 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 SNRPGP62308 76 aaKnown RBP12.47□□□□□ -0.41
CAST-223ENST00000508608 MC1RQ01726 317 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 TSTA3Q13630 321 aaPredicted RBP12.47□□□□□ -0.41
CAST-223ENST00000508608 CYP27C1Q4G0S4 372 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 TMEM220Q6QAJ8 160 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 LILRA3Q8N6C8 439 aaPredicted RBP12.47□□□□□ -0.41
CAST-223ENST00000508608 GALNT6Q8NCL4 622 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 PPP1R16AQ96I34 528 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 SGPP1Q9BX95 441 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 HOXD1Q9GZZ0 328 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 EPHX3Q9H6B9 360 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 SMURF1Q9HCE7 757 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 TRIM39Q9HCM9 518 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 QPCTLQ9NXS2 382 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 SPATA7Q9P0W8 599 aa12.47□□□□□ -0.41
CAST-223ENST00000508608 TLR4O00206 839 aa12.46□□□□□ -0.41
CAST-223ENST00000508608 TGFB1P01137 390 aa12.46□□□□□ -0.41
CAST-223ENST00000508608 GBAP04062 536 aa12.46□□□□□ -0.41
CAST-223ENST00000508608 TIMP2P16035 220 aa12.46□□□□□ -0.41
CAST-223ENST00000508608 CSTF2P33240 577 aaKnown RBP eCLIP12.46□□□□□ -0.41
CAST-223ENST00000508608 NNMTP40261 264 aa12.46□□□□□ -0.41
CAST-223ENST00000508608 CRISP3P54108 245 aa12.46□□□□□ -0.41
CAST-223ENST00000508608 MPEG1Q2M385 716 aa12.46□□□□□ -0.41
CAST-223ENST00000508608 AGAP6Q5VW22 663 aa12.46□□□□□ -0.41
CAST-223ENST00000508608 SLX4IPQ5VYV7 408 aa12.46□□□□□ -0.41
CAST-223ENST00000508608 GDPD3Q7L5L3 318 aa12.46□□□□□ -0.41
CAST-223ENST00000508608 TECPR1Q7Z6L1 1165 aa12.46□□□□□ -0.41
CAST-223ENST00000508608 TMEM25Q86YD3 366 aa12.46□□□□□ -0.41
CAST-223ENST00000508608 WDR48Q8TAF3 677 aa12.46□□□□□ -0.41
CAST-223ENST00000508608 SLC5A11Q8WWX8 675 aa12.46□□□□□ -0.41
CAST-223ENST00000508608 KLHL6Q8WZ60 621 aa12.46□□□□□ -0.41
CAST-223ENST00000508608 AP2M1Q96CW1 435 aa12.46□□□□□ -0.41
CAST-223ENST00000508608 SAMD11Q96NU1 681 aa12.46□□□□□ -0.41
CAST-223ENST00000508608 AGAP4Q96P64 663 aa12.46□□□□□ -0.41
CAST-223ENST00000508608 OR51B5Q9H339 312 aa12.46□□□□□ -0.41
CAST-223ENST00000508608 SIAEQ9HAT2 523 aa12.46□□□□□ -0.41
CAST-223ENST00000508608 SLITRK5O94991 958 aa12.46□□□□□ -0.42
CAST-223ENST00000508608 GASTP01350 101 aa12.46□□□□□ -0.42
CAST-223ENST00000508608 ELFN1P0C7U0 828 aa12.46□□□□□ -0.42
CAST-223ENST00000508608 OSMP13725 252 aa12.46□□□□□ -0.42
CAST-223ENST00000508608 PDHA2P29803 388 aa12.46□□□□□ -0.42
CAST-223ENST00000508608 ATN1P54259 1190 aaPredicted RBP12.46□□□□□ -0.42
CAST-223ENST00000508608 CARTPTQ16568 116 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms