RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 PLA2G4BP0C869 781 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 RALAP11233 206 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 PSKH1P11801 424 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 CYP11B1P15538 503 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 XRCC1P18887 633 aaPredicted RBP4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 PRKCHP24723 683 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 HLA-FP30511 346 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 AXLP30530 894 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 SHMT1P34896 483 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 EVI2BP34910 448 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 RORAP35398 523 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 HSD17B2P37059 387 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 SLC15A1P46059 708 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 MARCKSL1P49006 195 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 TPMTP51580 245 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 KPNA2P52292 529 aaKnown RBP4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 DGKQP52824 942 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 PLA2G16P53816 162 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 CXCR4P61073 352 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 ACTR2P61160 394 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 PSME3P61289 254 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 PRKCZQ05513 592 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 CHRNDQ07001 517 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 INCA1Q0VD86 236 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 GAB1Q13480 694 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 GPAT3Q53EU6 434 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 TFDP3Q5H9I0 405 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 COQ5Q5HYK3 327 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 PAGE2BQ5JRK9 111 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 MPP7Q5T2T1 576 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 SEL1L3Q68CR1 1132 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 TYW3Q6IPR3 259 aaKnown RBP4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 FAM45BPQ6NSW5 357 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 DARS2Q6PI48 645 aaKnown RBP4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 ZYG11AQ6WRX3 759 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 BBS12Q6ZW61 710 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 PRSS42Q7Z5A4 293 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 THNSL1Q8IYQ7 743 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 FAM71AQ8IYT1 594 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 CADM2Q8N3J6 435 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 MAGEB6Q8N7X4 407 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 NAT8LQ8N9F0 302 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 SLC44A5Q8NCS7 719 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 FAM45AQ8TCE6 357 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 CYGBQ8WWM9 190 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 ZNF566Q969W8 418 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 ATP6V1E2Q96A05 226 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 NXNL1Q96CM4 212 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 MTERF3Q96E29 417 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 P2RY11Q96G91 374 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 RADILQ96JH8 1075 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 ELMO2Q96JJ3 720 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 PPP3R2Q96LZ3 170 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 SERPINB11Q96P15 392 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 NODALQ96S42 347 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 PLIN2Q99541 437 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 TCEAL7Q9BRU2 100 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 FUNDC2Q9BWH2 189 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 ZNF416Q9BWM5 594 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 C1QTNF1Q9BXJ1 281 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 SLC22A4Q9H015 551 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 NARFLQ9H6Q4 476 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 KAT8Q9H7Z6 458 aaKnown RBP4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 TMEM206Q9H813 350 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 TRIM45Q9H8W5 580 aaPredicted RBP4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 UCK1Q9HA47 277 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 ZBTB26Q9HCK0 441 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 FANCFQ9NPI8 374 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 DYRK4Q9NR20 520 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 ABCB10Q9NRK6 738 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 AGPAT4Q9NRZ5 378 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 TBC1D13Q9NVG8 400 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 DUS2Q9NX74 493 aaKnown RBP4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 PAQR5Q9NXK6 330 aaPredicted RBP4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 SCN3BQ9NY72 215 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 TAS2R9Q9NYW1 312 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 ADA2Q9NZK5 511 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 ACTR3BQ9P1U1 418 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 NYAP2Q9P242 653 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 FBXO40Q9UH90 709 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 CHORDC1Q9UHD1 332 aaPredicted RBP4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 ADAM28Q9UKQ2 775 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 RAB23Q9ULC3 237 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 DIMT1Q9UNQ2 313 aaKnown RBP4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 PDE10AQ9Y233 779 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 RAP2CQ9Y3L5 183 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 NAALAD2Q9Y3Q0 740 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 PCDHAC2Q9Y5I4 1007 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 ORC6Q9Y5N6 252 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 FKBP7Q9Y680 259 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 CACNG2Q9Y698 323 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 MUC6Q6W4X9 2439 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 IGSF9BQ9UPX0 1349 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 SCN9AQ15858 1988 aa4.38□□□□□ -1.71
PDLIM5-211ENST00000508531 ALPK3Q96L96 1907 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 TRIP12Q14669 1992 aaPredicted RBP4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 TCF20Q9UGU0 1960 aaKnown RBP4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 TRBV5-3A0A0A0MS03 114 aa4.37□□□□□ -1.71
PDLIM5-211ENST00000508531 LOC100653049A0A140TA62 436 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms