RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 ELP5Q8TE02 316 aa18.64■□□□□ 0.57
SFXN1-209ENST00000508290 SNRNP40Q96DI7 357 aaKnown RBP18.64■□□□□ 0.57
SFXN1-209ENST00000508290 CNDP1Q96KN2 507 aa18.64■□□□□ 0.57
SFXN1-209ENST00000508290 STMN3Q9NZ72 180 aa18.64■□□□□ 0.57
SFXN1-209ENST00000508290 LUZP4Q9P127 313 aa18.64■□□□□ 0.57
SFXN1-209ENST00000508290 DCDC2Q9UHG0 476 aa18.64■□□□□ 0.57
SFXN1-209ENST00000508290 PHF11Q9UIL8 331 aa18.64■□□□□ 0.57
SFXN1-209ENST00000508290 A0A0G2JN53 185 aa18.63■□□□□ 0.57
SFXN1-209ENST00000508290 A8MUI8 341 aa18.63■□□□□ 0.57
SFXN1-209ENST00000508290 FAM227AF5H4B4 570 aa18.63■□□□□ 0.57
SFXN1-209ENST00000508290 PYCARD-AS1I3L0S3 204 aa18.63■□□□□ 0.57
SFXN1-209ENST00000508290 CYR61O00622 381 aa18.63■□□□□ 0.57
SFXN1-209ENST00000508290 SEMA3DO95025 777 aa18.63■□□□□ 0.57
SFXN1-209ENST00000508290 CELA2AP08217 269 aa18.63■□□□□ 0.57
SFXN1-209ENST00000508290 PPP2R1BP30154 601 aa18.63■□□□□ 0.57
SFXN1-209ENST00000508290 NAA20P61599 178 aa18.63■□□□□ 0.57
SFXN1-209ENST00000508290 HERVK_113P63132 956 aa18.63■□□□□ 0.57
SFXN1-209ENST00000508290 DDX39BQ13838 428 aaKnown RBP18.63■□□□□ 0.57
SFXN1-209ENST00000508290 SERTAD2Q14140 314 aa18.63■□□□□ 0.57
SFXN1-209ENST00000508290 CPSF6Q16630 551 aaKnown RBP eCLIP18.63■□□□□ 0.57
SFXN1-209ENST00000508290 ACER2Q5QJU3 275 aa18.63■□□□□ 0.57
SFXN1-209ENST00000508290 OR4C11Q6IEV9 310 aa18.63■□□□□ 0.57
SFXN1-209ENST00000508290 UBE3DQ7Z6J8 389 aa18.63■□□□□ 0.57
SFXN1-209ENST00000508290 SLC22A9Q8IVM8 553 aa18.63■□□□□ 0.57
SFXN1-209ENST00000508290 SHISA5Q8N114 240 aa18.63■□□□□ 0.57
SFXN1-209ENST00000508290 CYP4X1Q8N118 509 aa18.63■□□□□ 0.57
SFXN1-209ENST00000508290 HORMAD2Q8N7B1 307 aa18.63■□□□□ 0.57
SFXN1-209ENST00000508290 UBLCP1Q8WVY7 318 aaPredicted RBP18.63■□□□□ 0.57
SFXN1-209ENST00000508290 CCDC126Q96EE4 140 aa18.63■□□□□ 0.57
SFXN1-209ENST00000508290 SERPINI1Q99574 410 aa18.63■□□□□ 0.57
SFXN1-209ENST00000508290 BARD1Q99728 777 aaKnown RBP18.63■□□□□ 0.57
SFXN1-209ENST00000508290 ERVK-6Q9BXR3 956 aa18.63■□□□□ 0.57
SFXN1-209ENST00000508290 ADAP2Q9NPF8 381 aa18.63■□□□□ 0.57
SFXN1-209ENST00000508290 NECTIN3Q9NQS3 549 aa18.63■□□□□ 0.57
SFXN1-209ENST00000508290 MAP10Q9P2G4 905 aa18.63■□□□□ 0.57
SFXN1-209ENST00000508290 PPIEQ9UNP9 301 aaKnown RBP18.63■□□□□ 0.57
SFXN1-209ENST00000508290 PCDHGB6Q9Y5F9 930 aa18.63■□□□□ 0.57
SFXN1-209ENST00000508290 A8MT66 165 aa18.62■□□□□ 0.57
SFXN1-209ENST00000508290 OR7A17O14581 309 aa18.62■□□□□ 0.57
SFXN1-209ENST00000508290 TLX1P31314 330 aaPredicted RBP18.62■□□□□ 0.57
SFXN1-209ENST00000508290 ZRSR2Q15696 482 aaKnown RBP18.62■□□□□ 0.57
SFXN1-209ENST00000508290 ELAVL1Q15717 326 aaKnown RBP18.62■□□□□ 0.57
SFXN1-209ENST00000508290 FRG2Q64ET8 278 aa18.62■□□□□ 0.57
SFXN1-209ENST00000508290 GSPT2Q8IYD1 628 aaKnown RBP18.62■□□□□ 0.57
SFXN1-209ENST00000508290 TMEM132CQ8N3T6 1108 aa18.62■□□□□ 0.57
SFXN1-209ENST00000508290 TMEM151AQ8N4L1 468 aa18.62■□□□□ 0.57
SFXN1-209ENST00000508290 CISD2Q8N5K1 135 aaKnown RBP18.62■□□□□ 0.57
SFXN1-209ENST00000508290 FAM47BQ8NA70 645 aa18.62■□□□□ 0.57
SFXN1-209ENST00000508290 B3GNT7Q8NFL0 401 aa18.62■□□□□ 0.57
SFXN1-209ENST00000508290 WDR20Q8TBZ3 569 aa18.62■□□□□ 0.57
SFXN1-209ENST00000508290 FRG2BQ96QU4 278 aa18.62■□□□□ 0.57
SFXN1-209ENST00000508290 MTERF1Q99551 399 aaKnown RBP18.62■□□□□ 0.57
SFXN1-209ENST00000508290 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.62■□□□□ 0.57
SFXN1-209ENST00000508290 LYARQ9NX58 379 aaKnown RBP18.62■□□□□ 0.57
SFXN1-209ENST00000508290 KCMF1Q9P0J7 381 aa18.62■□□□□ 0.57
SFXN1-209ENST00000508290 RNF11Q9Y3C5 154 aa18.62■□□□□ 0.57
SFXN1-209ENST00000508290 LRRC14BA6NHZ5 514 aa18.61■□□□□ 0.57
SFXN1-209ENST00000508290 CDH16O75309 829 aa18.61■□□□□ 0.57
SFXN1-209ENST00000508290 GLRA3O75311 464 aa18.61■□□□□ 0.57
SFXN1-209ENST00000508290 WDPCPO95876 746 aa18.61■□□□□ 0.57
SFXN1-209ENST00000508290 ATP5F1P24539 256 aaPredicted RBP18.61■□□□□ 0.57
SFXN1-209ENST00000508290 STX4Q12846 297 aa18.61■□□□□ 0.57
SFXN1-209ENST00000508290 IFT88Q13099 833 aa18.61■□□□□ 0.57
SFXN1-209ENST00000508290 TRAF3Q13114 568 aa18.61■□□□□ 0.57
SFXN1-209ENST00000508290 TTC19Q6DKK2 380 aaPredicted RBP18.61■□□□□ 0.57
SFXN1-209ENST00000508290 FAM180AQ6UWF9 173 aa18.61■□□□□ 0.57
SFXN1-209ENST00000508290 ZNF793Q6ZN11 406 aa18.61■□□□□ 0.57
SFXN1-209ENST00000508290 MILR1Q7Z6M3 343 aa18.61■□□□□ 0.57
SFXN1-209ENST00000508290 ARMC10Q8N2F6 343 aa18.61■□□□□ 0.57
SFXN1-209ENST00000508290 OR52B6Q8NGF0 335 aa18.61■□□□□ 0.57
SFXN1-209ENST00000508290 OR1N1Q8NGS0 311 aa18.61■□□□□ 0.57
SFXN1-209ENST00000508290 ZNF483Q8TF39 744 aaPredicted RBP18.61■□□□□ 0.57
SFXN1-209ENST00000508290 MZB1Q8WU39 189 aa18.61■□□□□ 0.57
SFXN1-209ENST00000508290 DAZLQ92904 295 aaKnown RBP18.61■□□□□ 0.57
SFXN1-209ENST00000508290 OR51B5Q9H339 312 aa18.61■□□□□ 0.57
SFXN1-209ENST00000508290 ELOVL6Q9H5J4 265 aa18.61■□□□□ 0.57
SFXN1-209ENST00000508290 NMRK1Q9NWW6 199 aa18.61■□□□□ 0.57
SFXN1-209ENST00000508290 AHSPQ9NZD4 102 aa18.61■□□□□ 0.57
SFXN1-209ENST00000508290 CSAG2Q9Y5P2 127 aa18.61■□□□□ 0.57
SFXN1-209ENST00000508290 SCN3AQ9NY46 2000 aa18.61■□□□□ 0.57
SFXN1-209ENST00000508290 PLPP1O14494 284 aa18.6■□□□□ 0.57
SFXN1-209ENST00000508290 PRAMEF2O60811 474 aa18.6■□□□□ 0.57
SFXN1-209ENST00000508290 MLYCDO95822 493 aa18.6■□□□□ 0.57
SFXN1-209ENST00000508290 SBK3P0C264 359 aa18.6■□□□□ 0.57
SFXN1-209ENST00000508290 PYGBP11216 843 aa18.6■□□□□ 0.57
SFXN1-209ENST00000508290 CPN2P22792 545 aa18.6■□□□□ 0.57
SFXN1-209ENST00000508290 BUD31P41223 144 aaPredicted RBP18.6■□□□□ 0.57
SFXN1-209ENST00000508290 CCT5P48643 541 aa18.6■□□□□ 0.57
SFXN1-209ENST00000508290 CLCN2P51788 898 aa18.6■□□□□ 0.57
SFXN1-209ENST00000508290 RPS13P62277 151 aaKnown RBP18.6■□□□□ 0.57
SFXN1-209ENST00000508290 GPR180Q86V85 440 aa18.6■□□□□ 0.57
SFXN1-209ENST00000508290 RPS19BP1Q86WX3 136 aaKnown RBP18.6■□□□□ 0.57
SFXN1-209ENST00000508290 NUDT13Q86X67 352 aa18.6■□□□□ 0.57
SFXN1-209ENST00000508290 CRLF3Q8IUI8 442 aa18.6■□□□□ 0.57
SFXN1-209ENST00000508290 BCORP1Q8N888 145 aa18.6■□□□□ 0.57
SFXN1-209ENST00000508290 NFAM1Q8NET5 270 aaPredicted RBP18.6■□□□□ 0.57
SFXN1-209ENST00000508290 VMP1Q96GC9 406 aa18.6■□□□□ 0.57
SFXN1-209ENST00000508290 UTP23Q9BRU9 249 aaKnown RBP18.6■□□□□ 0.57
SFXN1-209ENST00000508290 DDX31Q9H8H2 851 aaKnown RBP18.6■□□□□ 0.57
SFXN1-209ENST00000508290 ANKZF1Q9H8Y5 726 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms