RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 CSF3RQ99062 836 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 ZPBPQ9BS86 351 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 NPLQ9BXD5 320 aaPredicted RBP13.41□□□□□ -0.26
RNF4-208ENST00000507247 ULBP3Q9BZM4 244 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 SPRY4Q9C004 299 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 NMUR2Q9GZQ4 415 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 AKIRIN1Q9H9L7 192 aaPredicted RBP13.41□□□□□ -0.26
RNF4-208ENST00000507247 POLR1BQ9H9Y6 1135 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 MYNNQ9NPC7 610 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 SLC22A11Q9NSA0 550 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 LYARQ9NX58 379 aaKnown RBP13.41□□□□□ -0.26
RNF4-208ENST00000507247 TRIM33Q9UPN9 1127 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 EXO1Q9UQ84 846 aaKnown RBP13.41□□□□□ -0.26
RNF4-208ENST00000507247 ATG4BQ9Y4P1 393 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 SEC16AO15027 2179 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 CROCCQ5TZA2 2017 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 A0A1W2PR48 441 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 FCHO1O14526 889 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 STK17BO94768 372 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 LRATO95237 230 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 DLGAP3O95886 979 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 CD1EP15812 388 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 GPX3P22352 226 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 IL12AP29459 219 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 MRPL19P49406 292 aaKnown RBP13.4□□□□□ -0.26
RNF4-208ENST00000507247 ATP4BP51164 291 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 RAB38P57729 211 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 UFM1P61960 85 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 TRA2BP62995 288 aaKnown RBP13.4□□□□□ -0.26
RNF4-208ENST00000507247 SKP1P63208 163 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 SHC2P98077 582 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 MC1RQ01726 317 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 KLC1Q07866 573 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 FOXC1Q12948 553 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 CAMK2BQ13554 666 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 UBAP2LQ14157 1087 aaKnown RBP13.4□□□□□ -0.26
RNF4-208ENST00000507247 PDCD4Q53EL6 469 aaKnown RBP13.4□□□□□ -0.26
RNF4-208ENST00000507247 C18orf63Q68DL7 685 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 FAM71E1Q6IPT2 247 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 LCN10Q6JVE6 187 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 NIPAL1Q6NVV3 410 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 PRMT9Q6P2P2 845 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 GPR180Q86V85 440 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 PARP9Q8IXQ6 854 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 CACNA2D3Q8IZS8 1091 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 DSELQ8IZU8 1212 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 KRTCAP2Q8N6L1 136 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 ANKS4BQ8N8V4 417 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 GALNT6Q8NCL4 622 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 OR9I1Q8NGQ6 314 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 GFM2Q969S9 779 aaKnown RBP13.4□□□□□ -0.26
RNF4-208ENST00000507247 TEX37Q96LM6 180 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 LRFN5Q96NI6 719 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 ASPSCR1Q9BZE9 553 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 MYLK2Q9H1R3 596 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 ZNF304Q9HCX3 659 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 LYRM4Q9HD34 91 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 SAR1AQ9NR31 198 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 SDR39U1Q9NRG7 319 aaPredicted RBP13.4□□□□□ -0.26
RNF4-208ENST00000507247 KLK13Q9UKR3 277 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 CDC14AQ9UNH5 594 aa13.4□□□□□ -0.26
RNF4-208ENST00000507247 C9JVG2 144 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 FAM227AF5H4B4 570 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 MEN1O00255 615 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 PROM1O43490 865 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 AKAP10O43572 662 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 AIFM1O95831 613 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 FBLP22087 321 aaKnown RBP13.39□□□□□ -0.27
RNF4-208ENST00000507247 CPN2P22792 545 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 GSTM5P46439 218 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 ZFP36L2P47974 494 aaKnown RBP13.39□□□□□ -0.27
RNF4-208ENST00000507247 HNRNPFP52597 415 aaKnown RBP13.39□□□□□ -0.27
RNF4-208ENST00000507247 CLDN8P56748 225 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 TNFRSF17Q02223 184 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 C2orf80Q0P641 193 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 DSG2Q14126 1118 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 SQLEQ14534 574 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 NDUFAF5Q5TEU4 345 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 ARHGAP40Q5TG30 622 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 PAOXQ6QHF9 649 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 TIPARPQ7Z3E1 657 aaKnown RBP13.39□□□□□ -0.27
RNF4-208ENST00000507247 MTDHQ86UE4 582 aaKnown RBP13.39□□□□□ -0.27
RNF4-208ENST00000507247 TMEM132CQ8N3T6 1108 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 CPSF7Q8N684 471 aaKnown RBP13.39□□□□□ -0.27
RNF4-208ENST00000507247 FAM47BQ8NA70 645 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 TMEM52Q8NDY8 209 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 OR51Q1Q8NH59 317 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 COL26A1Q96A83 441 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 PEX11GQ96HA9 241 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 SLC46A1Q96NT5 459 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 RBCK1Q9BYM8 510 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 PHF11Q9UIL8 331 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 WASF3Q9UPY6 502 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 MAP4K5Q9Y4K4 846 aa13.39□□□□□ -0.27
RNF4-208ENST00000507247 WASHC1A8K0Z3 465 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 CDRT15L2A8MXV6 281 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 CYR61O00622 381 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 NVLO15381 856 aaKnown RBP13.38□□□□□ -0.27
RNF4-208ENST00000507247 ONECUT2O95948 504 aa13.38□□□□□ -0.27
RNF4-208ENST00000507247 NR2F6P10588 404 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms