RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 DESP17661 470 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 MAOAP21397 527 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 PRTN3P24158 256 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 EEF1GP26641 437 aaKnown RBP2.99□□□□□ -1.93
TCOF1-208ENST00000506063 PON1P27169 355 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 IL1R2P27930 398 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 PPP2R1BP30154 601 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 ZNF165P49910 485 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 EFNA4P52798 201 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 C21orf58P58505 322 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 EEF1A1P68104 462 aaKnown RBP2.99□□□□□ -1.93
TCOF1-208ENST00000506063 FMO1Q01740 532 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 MYL5Q02045 173 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 FUT7Q11130 342 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 ZBTB17Q13105 803 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 DPYSL2Q16555 572 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 EXOC3L4Q17RC7 722 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 DPCR1Q3MIW9 517 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 CCSMST1Q4G0I0 132 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 EIPR1Q53HC9 387 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 PPP6R3Q5H9R7 873 aaPredicted RBP2.99□□□□□ -1.93
TCOF1-208ENST00000506063 CT47A1Q5JQC4 288 aaPredicted RBP2.99□□□□□ -1.93
TCOF1-208ENST00000506063 PRAMEF20Q5VT98 475 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 EEF1A1P5Q5VTE0 462 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 ISM2Q6H9L7 571 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 TMEM214Q6NUQ4 689 aaKnown RBP2.99□□□□□ -1.93
TCOF1-208ENST00000506063 LEG1Q6P5S2 330 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 TMCO3Q6UWJ1 677 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 THSD4Q6ZMP0 1018 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 ZNF793Q6ZN11 406 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 GBP6Q6ZN66 633 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 FAM214BQ7L5A3 538 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 WFDC8Q8IUA0 241 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 VRK3Q8IV63 474 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 HMGCLL1Q8TB92 370 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 ZNF398Q8TD17 642 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 PAQR8Q8TEZ7 354 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 DVL3Q92997 716 aaPredicted RBP2.99□□□□□ -1.93
TCOF1-208ENST00000506063 NCLNQ969V3 563 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 TP53INP1Q96A56 240 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 IMP4Q96G21 291 aaKnown RBP2.99□□□□□ -1.93
TCOF1-208ENST00000506063 PEX11GQ96HA9 241 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 BTBD6Q96KE9 485 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 SGCZQ96LD1 299 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 ADAD1Q96M93 576 aaKnown RBP2.99□□□□□ -1.93
TCOF1-208ENST00000506063 TSGA13Q96PP4 275 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 DUX5Q96PT3 197 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 OR1F2PQ96R84 312 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 SERINC2Q96SA4 455 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 PCDHB18PQ96TA0 734 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 DPH7Q9BTV6 452 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 GATA5Q9BWX5 397 aaPredicted RBP2.99□□□□□ -1.93
TCOF1-208ENST00000506063 SUCNR1Q9BXA5 334 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 KRTAP4-5Q9BYR2 181 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 KLHL4Q9C0H6 718 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 VPS16Q9H269 839 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 PDCL3Q9H2J4 239 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 ACBD3Q9H3P7 528 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 ALG2Q9H553 416 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 NECTIN3Q9NQS3 549 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 CBLN4Q9NTU7 201 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 WHRNQ9P202 907 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 FETUBQ9UGM5 382 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 DNAJC12Q9UKB3 198 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 FBXW2Q9UKT8 454 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 CNOT11Q9UKZ1 510 aaKnown RBP2.99□□□□□ -1.93
TCOF1-208ENST00000506063 TTLL3Q9Y4R7 772 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 CHCHD2Q9Y6H1 151 aaPredicted RBP2.99□□□□□ -1.93
TCOF1-208ENST00000506063 PRSS21Q9Y6M0 314 aa2.99□□□□□ -1.93
TCOF1-208ENST00000506063 LOC105371242A0A075B767 164 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 TRBV5-4A0A0C4DH59 114 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 LOC285095A0A1B0GVY8 99 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 DNAJC9-AS1A6NH13 148 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 ZNF860A6NHJ4 632 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 A8MUA0 341 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 E7ENX8 843 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 E7EQL1 145 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 GOLGA6L19H0YKK7 550 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 GFYI3L273 518 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 K7EIL1 84 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 LIN7AO14910 233 aaPredicted RBP2.98□□□□□ -1.93
TCOF1-208ENST00000506063 DAPK3O43293 454 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 EMC8O43402 210 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 GPC4O75487 556 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 SRP72O76094 671 aaKnown RBP2.98□□□□□ -1.93
TCOF1-208ENST00000506063 MYO1DO94832 1006 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 LRATO95237 230 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 ACSL3O95573 720 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 NDST3O95803 873 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 P04436 131 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 CD3EP07766 207 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 FHP07954 510 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 CYP4B1P13584 511 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 CD44P16070 742 aaKnown RBP2.98□□□□□ -1.93
TCOF1-208ENST00000506063 GDF1P27539 372 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 MIPP30301 263 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 TTKP33981 857 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 AVPR1BP47901 424 aa2.98□□□□□ -1.93
TCOF1-208ENST00000506063 CDKN1CP49918 316 aaPredicted RBP2.98□□□□□ -1.93
TCOF1-208ENST00000506063 PDLIM4P50479 330 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms