RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 OSTNP61366 133 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 ZXDBP98169 803 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 SRYQ05066 204 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 TRAP1Q12931 704 aaKnown RBP3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 TRDNQ13061 729 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 HNRNPDQ14103 355 aaKnown RBP3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 CTTNQ14247 550 aaKnown RBP3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 KRT81Q14533 505 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 OPCMLQ14982 345 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 EXOSC7Q15024 291 aaKnown RBP3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 HERC3Q15034 1050 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 TPSAB1Q15661 275 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 AMZ1Q400G9 498 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 PDLIM3Q53GG5 364 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 ASPRV1Q53RT3 343 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 LY6G5CQ5SRR4 150 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 PIP5KL1Q5T9C9 394 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 PRAMEF17Q5VTA0 474 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 FAM109BQ6ICB4 259 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 KIAA1161Q6NSJ0 714 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 WASH2PQ6VEQ5 465 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 TMEM64Q6YI46 380 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 C17orf107Q6ZR85 190 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 TTLL10Q6ZVT0 673 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 PAQR9Q6ZVX9 377 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 TRPM8Q7Z2W7 1104 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 P4HA3Q7Z4N8 544 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 PRUNE1Q86TP1 453 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 CDR2LQ86X02 465 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 CBWD2Q8IUF1 395 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 C1orf210Q8IVY1 113 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 CCDC60Q8IWA6 550 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 EFCAB13Q8IY85 973 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 KATNAL2Q8IYT4 538 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 FAM9CQ8IZT9 166 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 PRSS35Q8N3Z0 413 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 TMEM151AQ8N4L1 468 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 KLHDC1Q8N7A1 406 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 CCDC197Q8NCU1 140 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 ZNF548Q8NEK5 533 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 OR5D13Q8NGL4 314 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 OR6M1Q8NGM8 313 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 OR4L1Q8NH43 312 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 OR5R1Q8NH85 324 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 LILRB4Q8NHJ6 448 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 THAP6Q8TBB0 222 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 RAET1EQ8TD07 263 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 SAP25Q8TEE9 199 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 TCP11Q8WWU5 503 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 PIBF1Q8WXW3 757 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 LARP4BQ92615 738 aaKnown RBP3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 HAS1Q92839 578 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 ISG20Q96AZ6 181 aaKnown RBP3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 TMEM19Q96HH6 336 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 RBM41Q96IZ5 413 aaKnown RBP3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 TXNDC15Q96J42 360 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 FAM84BQ96KN1 310 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 C12orf66Q96MD2 445 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 VSTM2LQ96N03 204 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 WDR77Q9BQA1 342 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 RIOK1Q9BRS2 568 aaKnown RBP3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 CHRDL1Q9BU40 450 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 WRAP53Q9BUR4 548 aaKnown RBP3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 TSSK1BQ9BXA7 367 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 VN1R1Q9GZP7 353 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 DHX33Q9H6R0 707 aaKnown RBP3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 KAT8Q9H7Z6 458 aaKnown RBP3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 NOX4Q9NPH5 578 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 AURKAIP1Q9NWT8 199 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 C1orf123Q9NWV4 160 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 FAM120CQ9NX05 1096 aaKnown RBP3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 SLC2A8Q9NY64 477 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 GCNT4Q9P109 453 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 DKK2Q9UBU2 259 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 EPHA6Q9UF33 1036 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 TCAF1Q9Y4C2 921 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 NINLQ9Y2I6 1382 aa3.37□□□□□ -1.87
HMGB1P22-201ENST00000505315 LOC100506127A0A0U1RQW1 187 aa3.36□□□□□ -1.87
HMGB1P22-201ENST00000505315 A0A1B0GVL5 298 aa3.36□□□□□ -1.87
HMGB1P22-201ENST00000505315 ERICH2A1L162 156 aa3.36□□□□□ -1.87
HMGB1P22-201ENST00000505315 GOLGA6L9A6NEM1 432 aa3.36□□□□□ -1.87
HMGB1P22-201ENST00000505315 TARM1B6A8C7 271 aa3.36□□□□□ -1.87
HMGB1P22-201ENST00000505315 NPIPB6E9PJ23 425 aa3.36□□□□□ -1.87
HMGB1P22-201ENST00000505315 CCL24O00175 119 aa3.36□□□□□ -1.87
HMGB1P22-201ENST00000505315 DVL1O14640 695 aa3.36□□□□□ -1.87
HMGB1P22-201ENST00000505315 CFLARO15519 480 aa3.36□□□□□ -1.87
HMGB1P22-201ENST00000505315 ARHGEF9O43307 516 aa3.36□□□□□ -1.87
HMGB1P22-201ENST00000505315 RANBP6O60518 1105 aaKnown RBP3.36□□□□□ -1.87
HMGB1P22-201ENST00000505315 PRKRAO75569 313 aaKnown RBP3.36□□□□□ -1.87
HMGB1P22-201ENST00000505315 CTAG2O75638 210 aa3.36□□□□□ -1.87
HMGB1P22-201ENST00000505315 SCGNO76038 276 aa3.36□□□□□ -1.87
HMGB1P22-201ENST00000505315 YEATS4O95619 227 aa3.36□□□□□ -1.87
HMGB1P22-201ENST00000505315 FHP07954 510 aa3.36□□□□□ -1.87
HMGB1P22-201ENST00000505315 C1QTNF9P0C862 333 aa3.36□□□□□ -1.87
HMGB1P22-201ENST00000505315 CYP11B1P15538 503 aa3.36□□□□□ -1.87
HMGB1P22-201ENST00000505315 JUNBP17275 347 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P22-201ENST00000505315 AMD1P17707 334 aa3.36□□□□□ -1.87
HMGB1P22-201ENST00000505315 TNNI1P19237 187 aa3.36□□□□□ -1.87
HMGB1P22-201ENST00000505315 MSH3P20585 1137 aa3.36□□□□□ -1.87
HMGB1P22-201ENST00000505315 CBLP22681 906 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms