RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 METTL27Q8N6F8 245 aaPredicted RBP4.66□□□□□ -1.66
LMNB1-208ENST00000504788 ARFGAP2Q8N6H7 521 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 C1orf52Q8N6N3 182 aaKnown RBP4.66□□□□□ -1.66
LMNB1-208ENST00000504788 GOLGA6L1Q8N7Z2 621 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 RFWD2Q8NHY2 731 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 FAM76AQ8TAV0 307 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 ZCCHC10Q8TBK6 192 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 LRRC8CQ8TDW0 803 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 SNRNP27Q8WVK2 155 aaKnown RBP4.66□□□□□ -1.66
LMNB1-208ENST00000504788 RERGQ96A58 199 aaPredicted RBP4.66□□□□□ -1.66
LMNB1-208ENST00000504788 FKBP10Q96AY3 582 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 REPS1Q96D71 796 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 NXPE2Q96DL1 559 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 C19orf60Q96EN9 201 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 ZNF764Q96H86 408 aaPredicted RBP4.66□□□□□ -1.66
LMNB1-208ENST00000504788 TEX37Q96LM6 180 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 ZNF681Q96N22 645 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 SERINC2Q96SA4 455 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 SERPINI1Q99574 410 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 CCT7Q99832 543 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 MAPKAP1Q9BPZ7 522 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 WDR77Q9BQA1 342 aaPredicted RBP4.66□□□□□ -1.66
LMNB1-208ENST00000504788 DPH2Q9BQC3 489 aaPredicted RBP4.66□□□□□ -1.66
LMNB1-208ENST00000504788 NDC1Q9BTX1 674 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 NPLQ9BXD5 320 aaPredicted RBP4.66□□□□□ -1.66
LMNB1-208ENST00000504788 NLNQ9BYT8 704 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 NUF2Q9BZD4 464 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 TRIM4Q9C037 500 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 FAM117AQ9C073 453 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 AKTIPQ9H8T0 292 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 WDR54Q9H977 334 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 CLK4Q9HAZ1 481 aaKnown RBP4.66□□□□□ -1.66
LMNB1-208ENST00000504788 EML4Q9HC35 981 aaKnown RBP4.66□□□□□ -1.66
LMNB1-208ENST00000504788 FGFR1OP2Q9NVK5 253 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 MARCOQ9UEW3 520 aaPredicted RBP4.66□□□□□ -1.66
LMNB1-208ENST00000504788 IL17BQ9UHF5 180 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 MCM8Q9UJA3 840 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 ANGPTL2Q9UKU9 493 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 SLC12A4Q9UP95 1085 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 USH1CQ9Y6N9 552 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 MAU2Q9Y6X3 613 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 EPG5Q9HCE0 2579 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 EXPH5Q8NEV8 1989 aa4.66□□□□□ -1.66
LMNB1-208ENST00000504788 A0A087WV48 116 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 LOC102723996A0A087X1L8 192 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 STMND1H3BQB6 276 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 CHST10O43529 356 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 RAD1O60671 282 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 HBQ1P09105 142 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 RAB40ALP0C0E4 278 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 BCKDHAP12694 445 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 DRD4P21917 467 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 HMOX2P30519 316 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 TIA1P31483 386 aaKnown RBP eCLIP4.65□□□□□ -1.662e-18■■■■■ 51.7
LMNB1-208ENST00000504788 LSP1P33241 339 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 FRKP42685 505 aaPredicted RBP4.65□□□□□ -1.66
LMNB1-208ENST00000504788 ARL4DP49703 201 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 IDH3AP50213 366 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 MTTPP55157 894 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 DCDP81605 110 aaKnown RBP4.65□□□□□ -1.66
LMNB1-208ENST00000504788 RGS1Q08116 209 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 IL10RAQ13651 578 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 PTGR1Q14914 329 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 PDCD2Q16342 344 aaPredicted RBP4.65□□□□□ -1.66
LMNB1-208ENST00000504788 SMU1Q2TAY7 513 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 AP5B1Q2VPB7 878 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 LSM12Q3MHD2 195 aaKnown RBP4.65□□□□□ -1.66
LMNB1-208ENST00000504788 CRTC2Q53ET0 693 aaPredicted RBP4.65□□□□□ -1.66
LMNB1-208ENST00000504788 ZNF385BQ569K4 471 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 SGO1Q5FBB7 561 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 TMEM198Q66K66 360 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 C18orf63Q68DL7 685 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 FAM71E1Q6IPT2 247 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 NOXRED1Q6NXP6 359 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 TRIM40Q6P9F5 258 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 CYB5D1Q6P9G0 228 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 TMEM205Q6UW68 189 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 ABHD13Q7L211 337 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 PIGWQ7Z7B1 504 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 TRIM42Q8IWZ5 723 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 NLGN4XQ8N0W4 816 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 TTC29Q8NA56 475 aaPredicted RBP4.65□□□□□ -1.66
LMNB1-208ENST00000504788 KDF1Q8NAX2 398 aaPredicted RBP4.65□□□□□ -1.66
LMNB1-208ENST00000504788 NLGN4YQ8NFZ3 816 aaPredicted RBP4.65□□□□□ -1.66
LMNB1-208ENST00000504788 OR51Q1Q8NH59 317 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 SUN3Q8TAQ9 357 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 DNAJB14Q8TBM8 379 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 STT3BQ8TCJ2 826 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 ACTRT2Q8TDY3 377 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 CT55Q8WUE5 264 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 C10orf82Q8WW14 230 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 RGMAQ96B86 450 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 ANKRD9Q96BM1 317 aaPredicted RBP4.65□□□□□ -1.66
LMNB1-208ENST00000504788 BRINP2Q9C0B6 783 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 ZMYND15Q9H091 742 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 FANCEQ9HB96 536 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 ZNF304Q9HCX3 659 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 LYRM4Q9HD34 91 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 SLAMF7Q9NQ25 335 aa4.65□□□□□ -1.66
LMNB1-208ENST00000504788 THSD1Q9NS62 852 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms