RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 FAHD1Q6P587 224 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 SLC30A8Q8IWU4 369 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 AKAP1Q92667 903 aaKnown RBP eCLIP7.3□□□□□ -1.24
NEDD9-208ENST00000504387 PRR14Q9BWN1 585 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 B3GNT4Q9C0J1 378 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 SAP130Q9H0E3 1048 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 ANKHQ9HCJ1 492 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 B3GAT2Q9NPZ5 323 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 MRPL15Q9P015 296 aaKnown RBP7.3□□□□□ -1.24
NEDD9-208ENST00000504387 ZNF624Q9P2J8 865 aaPredicted RBP7.3□□□□□ -1.24
NEDD9-208ENST00000504387 ATP6V1HQ9UI12 483 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 DHRS7Q9Y394 339 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 ARID1AO14497 2285 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 CD8B2A6NJW9 211 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 INMT-MINDY4F8WBC2 141 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 AKAP8O43823 692 aaKnown RBP7.3□□□□□ -1.24
NEDD9-208ENST00000504387 NTN1O95631 604 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 ASGR1P07306 291 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 CD8BP10966 210 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 TACR2P21452 398 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 SLC6A4P31645 630 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 CSNK1DP48730 415 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 CLEC12AQ5QGZ9 265 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 ARTNQ5T4W7 220 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 TNFAIP8L2Q6P589 184 aaPredicted RBP7.3□□□□□ -1.24
NEDD9-208ENST00000504387 BRAT1Q6PJG6 821 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 TPGS1Q6ZTW0 290 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 VN1R5Q7Z5H4 357 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 COMMD7Q86VX2 200 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 KRT73Q86Y46 540 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 MMP21Q8N119 569 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 ZBTB44Q8NCP5 570 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 KCNJ9Q92806 393 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 RAB8BQ92930 207 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 PPP1R2P1Q96PQ5 205 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 SIGLEC11Q96RL6 698 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 C17orf62Q9BQA9 187 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 TRIM62Q9BVG3 475 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 SPATA9Q9BWV2 254 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 ARHGAP39Q9C0H5 1083 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 NXF2Q9GZY0 626 aaKnown RBP7.3□□□□□ -1.24
NEDD9-208ENST00000504387 TMEM248Q9NWD8 314 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 TXNL4BQ9NX01 149 aaKnown RBP7.3□□□□□ -1.24
NEDD9-208ENST00000504387 LRFN2Q9ULH4 789 aa7.3□□□□□ -1.24
NEDD9-208ENST00000504387 TRBV4-1A0A0J9YWV2 114 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 B8ZZF3 427 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 KLK8O60259 260 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 PRAMEF4O60810 478 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 PRAMEF11O60813 436 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 GJB5O95377 273 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 PAHP00439 452 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 GSTM1P09488 218 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 ARSBP15848 533 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 MYL12AP19105 171 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 RPL9P32969 192 aaKnown RBP7.29□□□□□ -1.24
NEDD9-208ENST00000504387 CRYBB2P43320 205 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 VSX2P58304 361 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-208ENST00000504387 RHOAP61586 193 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 IRF8Q02556 426 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 MLLT1Q03111 559 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-208ENST00000504387 ACSM2AQ08AH3 577 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 ABRQ12979 859 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 GRM7Q14831 915 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 PCBP2Q15366 365 aaKnown RBP eCLIP7.29□□□□□ -1.243e-6■■■■□ 20.8
NEDD9-208ENST00000504387 CHRNA6Q15825 494 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 FAM110CQ1W6H9 321 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 ZXDCQ2QGD7 858 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-208ENST00000504387 PRAMEF9Q5VWM5 478 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 AFMIDQ63HM1 303 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 ACSM2BQ68CK6 577 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 CXorf57Q6NSI4 855 aaKnown RBP7.29□□□□□ -1.24
NEDD9-208ENST00000504387 ANKS3Q6ZW76 656 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 UBE2R2Q712K3 238 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-208ENST00000504387 C1orf52Q8N6N3 182 aaKnown RBP7.29□□□□□ -1.24
NEDD9-208ENST00000504387 HMGB4Q8WW32 186 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 MRPS31Q92665 395 aaKnown RBP7.29□□□□□ -1.24
NEDD9-208ENST00000504387 NACC2Q96BF6 587 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 ASIC4Q96FT7 647 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 MS4A4AQ96JQ5 239 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 C8orf48Q96LL4 319 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 DCLRE1CQ96SD1 692 aaKnown RBP7.29□□□□□ -1.24
NEDD9-208ENST00000504387 NELL2Q99435 816 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 TBX5Q99593 518 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 DOHHQ9BU89 302 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 DUSP26Q9BV47 211 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 TSSK6Q9BXA6 273 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 GON7Q9BXV9 100 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 FAM124BQ9H5Z6 455 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-208ENST00000504387 NMNAT1Q9HAN9 279 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-208ENST00000504387 HSPE1-MOB4S4R3N1 261 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 CACNA1CQ13936 2221 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-208ENST00000504387 A0A1W2PPK0 400 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 MGAT4DA6NG13 374 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 GABRR3A8MPY1 467 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 LGALS8O00214 317 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 LYRM1O43325 122 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 NME6O75414 186 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-208ENST00000504387 ALDH1A1P00352 501 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 AKR1A1P14550 325 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms