RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 CASP9P55211 416 aa20.29■□□□□ 0.84
UBE2D3-216ENST00000503742 ILF3Q12906 894 aaKnown RBP eCLIP20.29■□□□□ 0.84
UBE2D3-216ENST00000503742 BIRC2Q13490 618 aa20.29■□□□□ 0.84
UBE2D3-216ENST00000503742 PRRT3Q5FWE3 981 aa20.29■□□□□ 0.84
UBE2D3-216ENST00000503742 HS3ST5Q8IZT8 346 aa20.29■□□□□ 0.84
UBE2D3-216ENST00000503742 SLC22A18Q96BI1 424 aa20.29■□□□□ 0.84
UBE2D3-216ENST00000503742 SDCCAG3Q96C92 435 aa20.29■□□□□ 0.84
UBE2D3-216ENST00000503742 FBXL20Q96IG2 436 aa20.29■□□□□ 0.84
UBE2D3-216ENST00000503742 TMEM121BQ9BXQ6 578 aaPredicted RBP20.29■□□□□ 0.84
UBE2D3-216ENST00000503742 SLC24A3Q9HC58 644 aa20.29■□□□□ 0.84
UBE2D3-216ENST00000503742 C5AR2Q9P296 337 aa20.29■□□□□ 0.84
UBE2D3-216ENST00000503742 ABCG2Q9UNQ0 655 aa20.29■□□□□ 0.84
UBE2D3-216ENST00000503742 A0A1B0GTW7 788 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 MAP3K13O43283 966 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 STATHP02808 62 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 DRD2P14416 443 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 SOAT1P35610 550 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 VLDLRP98155 873 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 GAS6Q14393 721 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 KIR2DS3Q14952 304 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 LIN52Q52LA3 116 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 MRM1Q6IN84 353 aaKnown RBP20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 PIWIL3Q7Z3Z3 882 aaKnown RBP20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 OR2L5Q8NG80 312 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 TSC22D3Q99576 134 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 GPR174Q9BXC1 333 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 NLNQ9BYT8 704 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 LMAN1LQ9HAT1 526 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 VNN3Q9NY84 501 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 MAP4K5Q9Y4K4 846 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 ERI3O43414 337 aaKnown RBP20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 NOBOXO60393 691 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 PGM3O95394 542 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 FABP3P05413 133 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 TFAP2AP05549 437 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 THRBP10828 461 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 NELFEP18615 380 aaKnown RBP20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 CD6P30203 668 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 MANFP55145 182 aaKnown RBP20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 EIF2B5Q13144 721 aaKnown RBP20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 IQCCQ4KMZ1 466 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 SPESP1Q6UW49 350 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 CCDC80Q76M96 950 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 PJA1Q8NG27 643 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 ZFPM2Q8WW38 1151 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 UCN3Q969E3 161 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 NEURL3Q96EH8 262 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 KCNC2Q96PR1 638 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 RBM4BQ9BQ04 359 aaKnown RBP20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 RBM4Q9BWF3 364 aaKnown RBP20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 TCEAL2Q9H3H9 227 aaPredicted RBP20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 SOX17Q9H6I2 414 aaPredicted RBP20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 SMURF2Q9HAU4 748 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 TM9SF3Q9HD45 589 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 NEUROD4Q9HD90 331 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 SIRT3Q9NTG7 399 aaPredicted RBP20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 ACSS1Q9NUB1 689 aaPredicted RBP20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 EHD3Q9NZN3 535 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 MYRFQ9Y2G1 1151 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 PCDHGA2Q9Y5H1 932 aa20.28■□□□□ 0.84
UBE2D3-216ENST00000503742 SPTY2D1-AS1A0A0U1RR47 76 aa20.27■□□□□ 0.84
UBE2D3-216ENST00000503742 EME2A4GXA9 379 aaPredicted RBP20.27■□□□□ 0.84
UBE2D3-216ENST00000503742 CLPTM1O96005 669 aa20.27■□□□□ 0.84
UBE2D3-216ENST00000503742 ALBP02768 609 aa20.27■□□□□ 0.84
UBE2D3-216ENST00000503742 HIST1H1TP22492 207 aaPredicted RBP20.27■□□□□ 0.84
UBE2D3-216ENST00000503742 KCNJ10P78508 379 aa20.27■□□□□ 0.84
UBE2D3-216ENST00000503742 PPP1R8Q12972 351 aaKnown RBP20.27■□□□□ 0.84
UBE2D3-216ENST00000503742 SCARB2Q14108 478 aa20.27■□□□□ 0.84
UBE2D3-216ENST00000503742 MLC1Q15049 377 aa20.27■□□□□ 0.84
UBE2D3-216ENST00000503742 TOR1AIP1Q5JTV8 583 aa20.27■□□□□ 0.84
UBE2D3-216ENST00000503742 NDUFAF5Q5TEU4 345 aa20.27■□□□□ 0.84
UBE2D3-216ENST00000503742 SAXO2Q658L1 398 aa20.27■□□□□ 0.84
UBE2D3-216ENST00000503742 OR2T5Q6IEZ7 315 aa20.27■□□□□ 0.84
UBE2D3-216ENST00000503742 PATL1Q86TB9 770 aaKnown RBP20.27■□□□□ 0.84
UBE2D3-216ENST00000503742 HIPK1Q86Z02 1210 aa20.27■□□□□ 0.84
UBE2D3-216ENST00000503742 OR2T29Q8NH02 315 aa20.27■□□□□ 0.84
UBE2D3-216ENST00000503742 EXOSC8Q96B26 276 aaKnown RBP20.27■□□□□ 0.84
UBE2D3-216ENST00000503742 ZBED6CLQ96FA7 236 aaPredicted RBP20.27■□□□□ 0.84
UBE2D3-216ENST00000503742 RMND5BQ96G75 393 aaPredicted RBP20.27■□□□□ 0.84
UBE2D3-216ENST00000503742 OR2A14Q96R47 310 aa20.27■□□□□ 0.84
UBE2D3-216ENST00000503742 ORAI3Q9BRQ5 295 aa20.27■□□□□ 0.84
UBE2D3-216ENST00000503742 ADPRHL2Q9NX46 363 aa20.27■□□□□ 0.84
UBE2D3-216ENST00000503742 APOBEC3BQ9UH17 382 aaKnown RBP20.27■□□□□ 0.84
UBE2D3-216ENST00000503742 DUSP12Q9UNI6 340 aa20.27■□□□□ 0.84
UBE2D3-216ENST00000503742 ASB4Q9Y574 426 aa20.27■□□□□ 0.84
UBE2D3-216ENST00000503742 SUV39H1O43463 412 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 CLIC3O95833 236 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 ARAFP10398 606 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 ATP5A1P25705 553 aaKnown RBP20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 AQP1P29972 269 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 NUDT1P36639 197 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 TSFMP43897 325 aaKnown RBP20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 ELOAQ14241 798 aaKnown RBP20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 GPR18Q14330 331 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 SLC9A5Q14940 896 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 ZNF630Q2M218 657 aaPredicted RBP20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 SHQ1Q6PI26 577 aaKnown RBP20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 VN1R4Q7Z5H5 301 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 FRMD1Q8N878 549 aa20.26■□□□□ 0.83
UBE2D3-216ENST00000503742 ACOT4Q8N9L9 421 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms