RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 FBXL19-AS1Q494R0 122 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 GPRC6AQ5T6X5 926 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 GRTP1Q5TC63 336 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 LGSNQ5TDP6 509 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 PTRHD1Q6GMV3 140 aaKnown RBP4.85□□□□□ -1.63
FXN-205ENST00000498653 LRIG3Q6UXM1 1119 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 PACS1Q6VY07 963 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 STRA8Q7Z7C7 330 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 GALNT7Q86SF2 657 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 CROCCP2Q86T23 111 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 LDB1Q86U70 411 aaPredicted RBP4.85□□□□□ -1.63
FXN-205ENST00000498653 LRRC6Q86X45 466 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 DENND6AQ8IWF6 608 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 CNTN4Q8IWV2 1026 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 PIANPQ8IYJ0 282 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 CNPY4Q8N129 248 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 DDHD1Q8NEL9 900 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 OR2W6PQ8NHA6 318 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 SLC44A1Q8WWI5 657 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 ANKRD7Q92527 254 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 RNASE6Q93091 150 aaKnown RBP4.85□□□□□ -1.63
FXN-205ENST00000498653 MISP3Q96FF7 219 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 COX14Q96I36 57 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 PAFAH2Q99487 392 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 TSSK1BQ9BXA7 367 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 TEX101Q9BY14 249 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 HES7Q9BYE0 225 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 ROPN1BQ9BZX4 212 aaPredicted RBP4.85□□□□□ -1.63
FXN-205ENST00000498653 CCDC68Q9H2F9 335 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 EPB41L4BQ9H329 900 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 ROPN1Q9HAT0 212 aaPredicted RBP4.85□□□□□ -1.63
FXN-205ENST00000498653 TRIM39Q9HCM9 518 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 FBXO6Q9NRD1 293 aaPredicted RBP4.85□□□□□ -1.63
FXN-205ENST00000498653 SMYD2Q9NRG4 433 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 FETUBQ9UGM5 382 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 SLC24A2Q9UI40 661 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 TMPRSS11EQ9UL52 423 aa4.85□□□□□ -1.63
FXN-205ENST00000498653 CNOT6Q9ULM6 557 aaKnown RBP4.85□□□□□ -1.63
FXN-205ENST00000498653 CORO1CQ9ULV4 474 aaPredicted RBP4.85□□□□□ -1.63
FXN-205ENST00000498653 ZNF407Q9C0G0 2248 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 ARHGAP21Q5T5U3 1957 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 IGLV3-16A0A075B6K0 115 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 IQANK1A0A1B0GTG1 560 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 A0A1B0GTH9 108 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 TLDC2A0PJX2 215 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 GOLGA6L10A6NI86 522 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 SLC22A31A6NKX4 558 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 SMIM23A6NLE4 172 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 GPR89AB7ZAQ6 455 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 H3BMM5 538 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 QSOX1O00391 747 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 PRMT5O14744 637 aaPredicted RBP4.84□□□□□ -1.63
FXN-205ENST00000498653 GPR39O43194 453 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 OR1I1O60431 355 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 CDH16O75309 829 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 MTX2O75431 263 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 PIAS1O75925 651 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 UBXN7O94888 489 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 CDK14O94921 469 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 HAUS5O94927 633 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 AP2A2O94973 939 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 C1QAP02745 245 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 AHSGP02765 367 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 ESR1P03372 595 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 F7P08709 466 aaPredicted RBP4.84□□□□□ -1.63
FXN-205ENST00000498653 SNRPAP09012 282 aaKnown RBP4.84□□□□□ -1.63
FXN-205ENST00000498653 OR56A5P0C7T3 313 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 GPR89BP0CG08 455 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 COL6A2P12110 1019 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 ATP1B2P14415 290 aaPredicted RBP4.84□□□□□ -1.63
FXN-205ENST00000498653 PKMP14618 531 aaKnown RBP4.84□□□□□ -1.63
FXN-205ENST00000498653 RPS3P23396 243 aaKnown RBP eCLIP4.84□□□□□ -1.63
FXN-205ENST00000498653 CNTFP26441 200 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 GABRB3P28472 473 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 SSTR4P31391 388 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 FMO4P31512 558 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 NSG1P42857 185 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 SLCO1A2P46721 670 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 SLC12A2P55011 1212 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 ADARP55265 1226 aaKnown RBP4.84□□□□□ -1.63
FXN-205ENST00000498653 RNF4P78317 190 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 TMEM115Q12893 351 aaPredicted RBP4.84□□□□□ -1.63
FXN-205ENST00000498653 BEAN1Q3B7T3 259 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 KRT71Q3SY84 523 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 ZNF766Q5HY98 468 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 CEP85LQ5SZL2 805 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 ZNF648Q5T619 568 aaPredicted RBP4.84□□□□□ -1.63
FXN-205ENST00000498653 ABHD17BQ5VST6 288 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 FAM45BPQ6NSW5 357 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 CNSTQ6PJW8 725 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 DOK6Q6PKX4 331 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 TMEM220Q6QAJ8 160 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 KIRREL2Q6UWL6 708 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 C22orf34Q6ZV56 151 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 DET1Q7L5Y6 550 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 NLRC3Q7RTR2 1065 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 TRIM74Q86UV6 250 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 ZC3HC1Q86WB0 502 aaKnown RBP4.84□□□□□ -1.63
FXN-205ENST00000498653 TDRPQ86YL5 185 aa4.84□□□□□ -1.63
FXN-205ENST00000498653 RIBC1Q8N443 379 aaPredicted RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms