RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 EPB42P16452 691 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 TYK2P29597 1187 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 CYB561P49447 251 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 SERPINB8P50452 374 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 HNRNPFP52597 415 aaKnown RBP7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 LIM2P55344 173 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 MLF1P58340 268 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 SRSF11Q05519 484 aaKnown RBP7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 RBPJQ06330 500 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 PCDH1Q08174 1060 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 RCN2Q14257 317 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 SETDB1Q15047 1291 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 ACAP2Q15057 778 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 TERF2Q15554 542 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 C1QL3Q5VWW1 255 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 GRHL2Q6ISB3 625 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 MED27Q6P2C8 311 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 KLC3Q6P597 504 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 GALNTL5Q7Z4T8 443 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 CLNKQ7Z7G1 428 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 FJX1Q86VR8 437 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 RELL1Q8IUW5 271 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 LAS2Q8IYD9 372 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 MMGT1Q8N4V1 131 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 TEX9Q8N6V9 391 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 APCDD1LQ8NCL9 501 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 B3GNT7Q8NFL0 401 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 ZNF473Q8WTR7 871 aaKnown RBP7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 VMP1Q96GC9 406 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 KCNC2Q96PR1 638 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 CSF3RQ99062 836 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 TBCDQ9BTW9 1192 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 MS4A8Q9BY19 250 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 DEFB126Q9BYW3 111 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 ROGDIQ9GZN7 287 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 TSPYL1Q9H0U9 437 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 CDC42EP4Q9H3Q1 356 aaKnown RBP7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 ACSS3Q9H6R3 686 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 ADAP2Q9NPF8 381 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 PRDM7Q9NQW5 492 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 NINJ2Q9NZG7 142 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 SEC14L3Q9UDX4 400 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 ANGPTL3Q9Y5C1 460 aa7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 DIDO1Q9BTC0 2240 aaKnown RBP7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 RP1L1Q8IWN7 2480 aaPredicted RBP7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 USP9XQ93008 2570 aaPredicted RBP7.92□□□□□ -1.14
HMGXB4-207ENST00000498212 MYO7BQ6PIF6 2116 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 TRGV8A0A0C4DH27 118 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 ASPDHA6ND91 283 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 ZG16O60844 167 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 SH3BGRLO75368 114 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 SLC25A12O75746 678 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 KLHL2O95198 593 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 ACSL3O95573 720 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 TGFB1P01137 390 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 ALDOAP04075 364 aaKnown RBP7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 IFNA16P05015 189 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 ATP5A1P25705 553 aaKnown RBP7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 COL8A1P27658 744 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 PPP2R1BP30154 601 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 SERPINB1P30740 379 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 SSR2P43308 183 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 ALDH18A1P54886 795 aaKnown RBP7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 ALDH6A1Q02252 535 aaKnown RBP7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 NAA30Q147X3 362 aaPredicted RBP7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 ZRSR2Q15696 482 aaKnown RBP7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 MAPKAPK3Q16644 382 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 PFKFB4Q16877 469 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 AP5B1Q2VPB7 878 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 TMEM35AQ53FP2 167 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 UBAP2Q5T6F2 1119 aaKnown RBP7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 ZNF468Q5VIY5 522 aaPredicted RBP7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 LIPJQ5W064 366 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 SLC25A25Q6KCM7 469 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 ZNF793Q6ZN11 406 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 CHSY3Q70JA7 882 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 UBE3DQ7Z6J8 389 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 MYLK4Q86YV6 388 aaPredicted RBP7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 ARMC10Q8N2F6 343 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 ACOT4Q8N9L9 421 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 MNS1Q8NEH6 495 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 OR7G3Q8NG95 312 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 THAP3Q8WTV1 239 aaPredicted RBP7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 IFT81Q8WYA0 676 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 NCLNQ969V3 563 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 RELTQ969Z4 430 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 TMEM125Q96AQ2 219 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 CMTM7Q96FZ5 175 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 FRMD6Q96NE9 622 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 FMO2Q99518 471 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 CCDC77Q9BR77 488 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 FUT8Q9BYC5 575 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 VPS11Q9H270 941 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 TRIM45Q9H8W5 580 aaPredicted RBP7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 LYRM4Q9HD34 91 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 KCMF1Q9P0J7 381 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 ADGRE2Q9UHX3 823 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 DMGDHQ9UI17 866 aaKnown RBP7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 FBXW2Q9UKT8 454 aa7.91□□□□□ -1.14
HMGXB4-207ENST00000498212 PPIEQ9UNP9 301 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms