RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 TRPV3Q8NET8 790 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 OR52I2Q8NH67 350 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 THAP6Q8TBB0 222 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 TMEM163Q8TC26 289 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 CCDC107Q8WV48 283 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 EME1Q96AY2 570 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 LGALS12Q96DT0 336 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 RITA1Q96K30 269 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 AGAP3Q96P47 875 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 CASD1Q96PB1 797 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 CLK4Q9HAZ1 481 aaKnown RBP5.64□□□□□ -1.51
BRCA1-224ENST00000497488 SLC2A4RGQ9NR83 387 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 DDX28Q9NUL7 540 aaKnown RBP5.64□□□□□ -1.51
BRCA1-224ENST00000497488 ONECUT1Q9UBC0 465 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 ERVK-19Q9WJR5 959 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 ZMYM6O95789 1325 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 PLEKHH1Q9ULM0 1364 aa5.64□□□□□ -1.51
BRCA1-224ENST00000497488 PPIAL4DF5H284 164 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 GOLGA8SH3BPF8 625 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 J3KR12 359 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 ALOX15BO15296 676 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 BCAS1O75363 584 aaPredicted RBP5.63□□□□□ -1.51
BRCA1-224ENST00000497488 RNF8O76064 485 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 RAF1P04049 648 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 CPN2P22792 545 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 CDC25AP30304 524 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 SRD5A2P31213 254 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 CDKN1BP46527 198 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 THOP1P52888 689 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 CSTF1Q05048 431 aaKnown RBP5.63□□□□□ -1.51
BRCA1-224ENST00000497488 ZNF415Q09FC8 603 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 PCK2Q16822 640 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 LRIT3Q3SXY7 679 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 GPAT3Q53EU6 434 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 ARMCX4Q5H9R4 360 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 TRMT11Q7Z4G4 463 aaKnown RBP5.63□□□□□ -1.51
BRCA1-224ENST00000497488 ECHDC2Q86YB7 292 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 CBWD2Q8IUF1 395 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 CCDC60Q8IWA6 550 aaPredicted RBP5.63□□□□□ -1.51
BRCA1-224ENST00000497488 MMD2Q8IY49 270 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 OFCC1Q8IZS5 231 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 ANKFN1Q8N957 763 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 OR5R1Q8NH85 324 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 LILRB4Q8NHJ6 448 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 SUN5Q8TC36 379 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 RNF128Q8TEB7 428 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 SUSD6Q92537 303 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 SEMA4DQ92854 862 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 ISG20Q96AZ6 181 aaKnown RBP5.63□□□□□ -1.51
BRCA1-224ENST00000497488 PINX1Q96BK5 328 aaKnown RBP5.63□□□□□ -1.51
BRCA1-224ENST00000497488 LRRC39Q96DD0 335 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 MRPL53Q96EL3 112 aaKnown RBP5.63□□□□□ -1.51
BRCA1-224ENST00000497488 ATP6V1G3Q96LB4 118 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 NDNQ99608 321 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 KXD1Q9BQD3 176 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 C11orf70Q9BRQ4 267 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 KRTAP4-8Q9BYQ9 185 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 LRRCC1Q9C099 1032 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 GANQ9H2C0 597 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 MEAF6Q9HAF1 191 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 ACKR4Q9NPB9 350 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 PTTG2Q9NZH5 202 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 P2RX2Q9UBL9 471 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 BCAP29Q9UHQ4 241 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 STK38LQ9Y2H1 464 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 ZNF536O15090 1300 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 TECPR2O15040 1411 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 FAM135BQ49AJ0 1406 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 ADGRL3Q9HAR2 1447 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 NCOA3Q9Y6Q9 1424 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 ADGRB1O14514 1584 aa5.63□□□□□ -1.51
BRCA1-224ENST00000497488 RNF222A6NCQ9 220 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 ANTXRLA6NF34 631 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 PATE3B3GLJ2 98 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 SAP30O75446 220 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 GRAP2O75791 330 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 GOT2P00505 430 aaKnown RBP5.62□□□□□ -1.51
BRCA1-224ENST00000497488 OR8G3PP0DMU2 310 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 PNMTP11086 282 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 CHMLP26374 656 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 STX2P32856 288 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 NUP62P37198 522 aaPredicted RBP5.62□□□□□ -1.51
BRCA1-224ENST00000497488 ABCG1P45844 678 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 SLC11A1P49279 550 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 NAPAP54920 295 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 GEMP55040 296 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 HSF1Q00613 529 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 NCBP1Q09161 790 aaKnown RBP5.62□□□□□ -1.51
BRCA1-224ENST00000497488 DNAJC3Q13217 504 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 PRAMEF5Q5TYX0 476 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 ASPHD1Q5U4P2 390 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 PRAMEF6Q5VXH4 476 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 LRRC66Q68CR7 880 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 HIST2H2AA3Q6FI13 130 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 PYHIN1Q6K0P9 492 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 TTC27Q6P3X3 843 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 LINGO4Q6UY18 593 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 GPSM1Q86YR5 675 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 SLC43A2Q8N370 569 aa5.62□□□□□ -1.51
BRCA1-224ENST00000497488 PPFIBP2Q8ND30 876 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms