RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 TBX19O60806 448 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 ITGA10O75578 1167 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 SRP72O76094 671 aaKnown RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 ANGPTL1O95841 491 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 IFNA10P01566 189 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 AHSGP02765 367 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 ANXA1P04083 346 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 ADRB1P08588 477 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 GIMD1P0DJR0 217 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 HSPD1P10809 573 aaKnown RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 MBL2P11226 248 aaPredicted RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 RNH1P13489 461 aaKnown RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 F3P13726 295 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 UGT1A6P19224 532 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 EPORP19235 508 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 EDNRBP24530 442 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 APEX1P27695 318 aaKnown RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 SFNP31947 248 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 CCR7P32248 378 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 UGT2B10P36537 528 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 MAP3K8P41279 467 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 ETV4P43268 484 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 NR4A2P43354 598 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 CARSP49589 748 aaKnown RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 MLLT10P55197 1068 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 NRG3P56975 720 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 KIAA1024LP59773 190 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 COPZ1P61923 177 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 ARF6P62330 175 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 RBX1P62877 108 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 HGFACQ04756 655 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 PPP3CAQ08209 521 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 MGAT3Q09327 533 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 STX4Q12846 297 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 IL18R1Q13478 541 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF169Q14929 603 aaPredicted RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 CDSNQ15517 529 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 SNAPC1Q16533 368 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 BAK1Q16611 211 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 UGT3A2Q3SY77 523 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 TAF1BQ53T94 588 aaPredicted RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 PAN3Q58A45 887 aaKnown RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 RAP1GAP2Q684P5 730 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 RGS7BPQ6MZT1 257 aaPredicted RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 TMEM71Q6P5X7 295 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 TMEM65Q6PI78 240 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 BRAT1Q6PJG6 821 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF767PQ75MW2 155 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 CATSPERDQ86XM0 798 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 DHX40Q8IX18 779 aaKnown RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 CLIP4Q8N3C7 705 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 CADM2Q8N3J6 435 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 FAM89BQ8N5H3 189 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 GPRC5AQ8NFJ5 357 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 OR2D3Q8NGH3 330 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 OR2T3Q8NH03 318 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 TBC1D15Q8TC07 691 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 NEK7Q8TDX7 302 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 SNX33Q8WV41 574 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 SLC35F5Q8WV83 523 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 HSD17B8Q92506 261 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 MAP4K1Q92918 833 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 KAT5Q92993 513 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 RGMAQ96B86 450 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 CAPZA3Q96KX2 299 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 TEFMQ96QE5 360 aaKnown RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 HSD17B14Q9BPX1 270 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 MGME1Q9BQP7 344 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF2Q9BSG1 426 aaPredicted RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 IFT27Q9BW83 186 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 NPLQ9BXD5 320 aaPredicted RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 TLR10Q9BXR5 811 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 SCAND2PQ9GZW5 306 aaPredicted RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 POLR3FQ9H1D9 316 aaPredicted RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 NOL11Q9H8H0 719 aaKnown RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 IL1RAPQ9NPH3 570 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 PRMT7Q9NVM4 692 aaPredicted RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 B3GNT2Q9NY97 397 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 SLCO1C1Q9NYB5 712 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 TREM2Q9NZC2 230 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 KCND2Q9NZV8 630 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 DBNLQ9UJU6 430 aaKnown RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 FBXW2Q9UKT8 454 aa2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 NDRG2Q9UN36 371 aaKnown RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 POLR3HQ9Y535 204 aaPredicted RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 SETD1AO15047 1707 aaKnown RBP2.97□□□□□ -1.93
SNRNP48-202ENST00000496946 RPTORQ8N122 1335 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 METTL21EPA6NDL7 271 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 NPIPB15A6NHN6 443 aaPredicted RBP2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 CBY3A6NI87 242 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 A8MU76 341 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 MYO1GB0I1T2 1018 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 H3BMM5 538 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 I3L4J1 428 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 M0QYV0 167 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 CTDSP2O14595 271 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 SEPT4O43236 478 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 TGFB1I1O43294 461 aa2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 BUD23O43709 281 aaKnown RBP2.96□□□□□ -1.94
SNRNP48-202ENST00000496946 HBP1O60381 514 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms