RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 ACOT4Q8N9L9 421 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 MDS2Q8NDY4 140 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 SRFBP1Q8NEF9 429 aaKnown RBP11.07□□□□□ -0.64
THBS3-208ENST00000496332 DNAJB8Q8NHS0 232 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 NR4A3Q92570 626 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 CSF3RQ99062 836 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 TBCDQ9BTW9 1192 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 DEFB126Q9BYW3 111 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 ROGDIQ9GZN7 287 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 PNO1Q9NRX1 252 aaKnown RBP11.07□□□□□ -0.64
THBS3-208ENST00000496332 ZNF358Q9NW07 568 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 KCMF1Q9P0J7 381 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 NFU1Q9UMS0 254 aa11.07□□□□□ -0.64
THBS3-208ENST00000496332 NBPF19A0A087WUL8 3843 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 A0A087WUV0 522 aaPredicted RBP11.06□□□□□ -0.64
THBS3-208ENST00000496332 WIPF3A6NGB9 483 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 SAP18O00422 153 aaKnown RBP11.06□□□□□ -0.64
THBS3-208ENST00000496332 CTNSO60931 367 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 KRT38O76015 456 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 SIX3O95343 332 aaPredicted RBP11.06□□□□□ -0.64
THBS3-208ENST00000496332 LDLRP01130 860 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 CD46P15529 392 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 HIST1H1TP22492 207 aaPredicted RBP11.06□□□□□ -0.64
THBS3-208ENST00000496332 ATP5A1P25705 553 aaKnown RBP11.06□□□□□ -0.64
THBS3-208ENST00000496332 TPP2P29144 1249 aaPredicted RBP11.06□□□□□ -0.64
THBS3-208ENST00000496332 MAGEA12P43365 314 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 TDGF1P3P51864 188 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 MLF1P58340 268 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 PMP22Q01453 160 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 DDX39BQ13838 428 aaKnown RBP11.06□□□□□ -0.64
THBS3-208ENST00000496332 GTF2H2Q13888 395 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 TERF2Q15554 542 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 AP5B1Q2VPB7 878 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 TECRLQ5HYJ1 363 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 DEPDC1Q5TB30 811 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 ZNF468Q5VIY5 522 aaPredicted RBP11.06□□□□□ -0.64
THBS3-208ENST00000496332 KHDRBS2Q5VWX1 349 aaKnown RBP11.06□□□□□ -0.64
THBS3-208ENST00000496332 LIPJQ5W064 366 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 GTF2H2CQ6P1K8 395 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 GOLGA7Q7Z5G4 137 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 RNF175Q8N4F7 328 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 PTGR2Q8N8N7 351 aaPredicted RBP11.06□□□□□ -0.64
THBS3-208ENST00000496332 APCDD1LQ8NCL9 501 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 B3GNT7Q8NFL0 401 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 HUS1BQ8NHY5 278 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 DCAKDQ8WVC6 231 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 ISL2Q96A47 359 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 CMTM7Q96FZ5 175 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 C5orf34Q96MH7 638 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 MAPKAP1Q9BPZ7 522 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 HES7Q9BYE0 225 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 OR51B5Q9H339 312 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 IPPKQ9H8X2 491 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 ACTR8Q9H981 624 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 LYRM4Q9HD34 91 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 KLHL1Q9NR64 748 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 LRFN1Q9P244 771 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 PLEKHB1Q9UF11 243 aaPredicted RBP11.06□□□□□ -0.64
THBS3-208ENST00000496332 ADGRE2Q9UHX3 823 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 PCDHGB6Q9Y5F9 930 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 CLDN16Q9Y5I7 305 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 TNPO3Q9Y5L0 923 aaKnown RBP11.06□□□□□ -0.64
THBS3-208ENST00000496332 CPAMD8Q8IZJ3 1885 aa11.06□□□□□ -0.64
THBS3-208ENST00000496332 TRBV11-1A0A0K0K1C0 115 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 MYOCOSA0A1B0GUC4 107 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 A1L4Q6 167 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 TRIM49D1C9J1S8 452 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 CDK2AP1O14519 115 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 LRRTM2O43300 516 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 NEURL1O76050 574 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 IFNA16P05015 189 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 SP1P08047 785 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 RBP1P09455 135 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 CNTFP26441 200 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 MST1P26927 711 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 EEF1DP29692 281 aaKnown RBP11.05□□□□□ -0.64
THBS3-208ENST00000496332 PIK3CBP42338 1070 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 SSR2P43308 183 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 PIK3CGP48736 1102 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 CLCN2P51788 898 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 KCNK10P57789 538 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 STX4Q12846 297 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 C4orf17Q53FE4 359 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 OR4C11Q6IEV9 310 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 SLC25A25Q6KCM7 469 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 METTL2BQ6P1Q9 378 aaKnown RBP11.05□□□□□ -0.64
THBS3-208ENST00000496332 IFT20Q8IY31 132 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 HORMAD2Q8N7B1 307 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 RGMAQ96B86 450 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 TRIM44Q96DX7 344 aaPredicted RBP11.05□□□□□ -0.64
THBS3-208ENST00000496332 PHF21BQ96EK2 531 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 SCMH1Q96GD3 660 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 SCYL1Q96KG9 808 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 SCN2AQ99250 2005 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 MTERF1Q99551 399 aaKnown RBP11.05□□□□□ -0.64
THBS3-208ENST00000496332 SORBS1Q9BX66 1292 aaKnown RBP11.05□□□□□ -0.64
THBS3-208ENST00000496332 ALOXE3Q9BYJ1 711 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 ADAP2Q9NPF8 381 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 ZNF180Q9UJW8 692 aa11.05□□□□□ -0.64
THBS3-208ENST00000496332 FBXW2Q9UKT8 454 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms