RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 TNFRSF21O75509 655 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 LDLRP01130 860 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 ETFAP13804 333 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 PVRP15151 417 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 IL1RNP18510 177 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 CERS1P27544 350 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 ARFIP1P53367 373 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 CRYBA2P53672 197 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 SLC9A5Q14940 896 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 C6orf52Q5T4I8 152 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 TRIM40Q6P9F5 258 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 ZNF438Q7Z4V0 828 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 ASPGQ86U10 573 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 UBALD2Q8IYN6 164 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 ZCCHC7Q8N3Z6 543 aaKnown RBP12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 TRIML2Q8N7C3 387 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 OR52N2Q8NGI0 321 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 NT5CQ8TCD5 201 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 EXOSC8Q96B26 276 aaKnown RBP12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 SLC47A1Q96FL8 570 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 SPATA9Q9BWV2 254 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 VCXQ9H320 206 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 RAPGEFL1Q9UHV5 662 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 RAB26Q9ULW5 256 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 SIT1Q9Y3P8 196 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 ENTPD2Q9Y5L3 495 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 AP4B1Q9Y6B7 739 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 A0A0J9YVX5 310 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 DLGAP1O14490 977 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 PDPK1O15530 556 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 P2RX6O15547 441 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 GCM2O75603 506 aaPredicted RBP12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 PRSS23O95084 383 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 KDELR2P33947 212 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 CRATP43155 626 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 CXCL12P48061 93 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 VEZF1Q14119 521 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 SPRED1Q7Z699 444 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 RNF130Q86XS8 419 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 TMEFF1Q8IYR6 380 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 OR5P2Q8WZ92 322 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 PYURFQ96I23 114 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 NR1H4Q96RI1 486 aaPredicted RBP12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 C1GALT1Q9NS00 363 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 ZNF639Q9UID6 485 aa12.98□□□□□ -0.33
SPTBN1-205ENST00000496323 LOC105369274A0A096LPK9 316 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 LOC102723532A0A0G2JNH3 316 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 GLOD5A6NK44 160 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 VGLL3A8MV65 326 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 TXNDC9O14530 226 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 PGRMC2O15173 223 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 SH3BP5O60239 455 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 DRD2P14416 443 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 MANFP55145 182 aaKnown RBP12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 MAZP56270 477 aaKnown RBP12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 STXBP1P61764 594 aaKnown RBP12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 MED21Q13503 144 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 LRRC23Q53EV4 343 aaPredicted RBP12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 FRMPD2BQ6IN97 320 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 ANGPTL8Q6UXH0 198 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 OR4N4Q8N0Y3 316 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 NATD1Q8N6N6 113 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 SRFBP1Q8NEF9 429 aaKnown RBP12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 UTP15Q8TED0 518 aaKnown RBP12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 RSC1A1Q92681 617 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 MAGIXQ9H6Y5 334 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 SIRT3Q9NTG7 399 aaPredicted RBP12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 EHD3Q9NZN3 535 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 MUTYHQ9UIF7 546 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 MAP4K5Q9Y4K4 846 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 OR5K3A6NET4 321 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 B4GALT2O60909 372 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 UBTFL6P0CB48 400 aaPredicted RBP12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 ZNF888P0CJ79 500 aaPredicted RBP12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 TYRP1P17643 537 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 UQCRC2P22695 453 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 PCGF2P35227 344 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 TSFMP43897 325 aaKnown RBP12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 HSPA13P48723 471 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 NXPH1P58417 271 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 GK3PQ14409 553 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 EID3Q8N140 333 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 BAHD1Q8TBE0 780 aaPredicted RBP12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 LMX1AQ8TE12 382 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 TRAPPC9Q96Q05 1148 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 C9orf16Q9BUW7 83 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 ASPSCR1Q9BZE9 553 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 UBAP1Q9NZ09 502 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 ANKMY1Q9P2S6 941 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 FBXW2Q9UKT8 454 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 FAF1Q9UNN5 650 aaPredicted RBP12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 PCDHGB5Q9Y5G0 923 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 SNX8Q9Y5X2 465 aa12.97□□□□□ -0.33
SPTBN1-205ENST00000496323 CROCCQ5TZA2 2017 aa12.96□□□□□ -0.33
SPTBN1-205ENST00000496323 TMEM229AB2RXF0 380 aa12.96□□□□□ -0.33
SPTBN1-205ENST00000496323 RASAL1O95294 804 aa12.96□□□□□ -0.33
SPTBN1-205ENST00000496323 AIFM1O95831 613 aa12.96□□□□□ -0.33
SPTBN1-205ENST00000496323 SMIM10L1P0DMW3 83 aa12.96□□□□□ -0.33
SPTBN1-205ENST00000496323 SOAT1P35610 550 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms