RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 GPR78Q96P69 363 aa13.31□□□□□ -0.28
RPRD1B-206ENST00000495457 KCNC2Q96PR1 638 aa13.31□□□□□ -0.28
RPRD1B-206ENST00000495457 DEFB126Q9BYW3 111 aa13.31□□□□□ -0.28
RPRD1B-206ENST00000495457 CDC42EP4Q9H3Q1 356 aaKnown RBP13.31□□□□□ -0.28
RPRD1B-206ENST00000495457 ACSS3Q9H6R3 686 aa13.31□□□□□ -0.28
RPRD1B-206ENST00000495457 PRM3Q9NNZ6 103 aa13.31□□□□□ -0.28
RPRD1B-206ENST00000495457 MTRF1LQ9UGC7 380 aaKnown RBP13.31□□□□□ -0.28
RPRD1B-206ENST00000495457 PCDHGB6Q9Y5F9 930 aa13.31□□□□□ -0.28
RPRD1B-206ENST00000495457 SYCE1LA8MT33 242 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 ZG16O60844 167 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 KLHL2O95198 593 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 SP1P08047 785 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 GFAPP14136 432 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 EPB42P16452 691 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 TYK2P29597 1187 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 EEF1DP29692 281 aaKnown RBP13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 ECHS1P30084 290 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 SERPINB8P50452 374 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 CLCN2P51788 898 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 GPR143P51810 404 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 TGM3Q08188 693 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 NAA30Q147X3 362 aaPredicted RBP13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 SETDB1Q15047 1291 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 ACAP2Q15057 778 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 MAPKAPK3Q16644 382 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 SLC25A25Q6KCM7 469 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 RELL1Q8IUW5 271 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 ZNF595Q8IYB9 648 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 TMEM178AQ8NBL3 297 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 ADAMTS18Q8TE60 1221 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 UBE2E3Q969T4 207 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 NCLNQ969V3 563 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 MAPKAP1Q9BPZ7 522 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 SORBS1Q9BX66 1292 aaKnown RBP13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 TSPAN10Q9H1Z9 355 aaPredicted RBP13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 VPS11Q9H270 941 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 OR51B5Q9H339 312 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 ZNF358Q9NW07 568 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 KCMF1Q9P0J7 381 aa13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 MRPS33Q9Y291 106 aaKnown RBP13.3□□□□□ -0.28
RPRD1B-206ENST00000495457 TRGV8A0A0C4DH27 118 aa13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 ASPDHA6ND91 283 aa13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 KLK8O60259 260 aa13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 PRKNO60260 465 aaPredicted RBP13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 SLC25A12O75746 678 aa13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 SIX3O95343 332 aaPredicted RBP13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 ATP5A1P25705 553 aaKnown RBP13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 CYB561P49447 251 aa13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 ID2Q02363 134 aa13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 PCDH1Q08174 1060 aa13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 DDX39BQ13838 428 aaKnown RBP13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 TERF2Q15554 542 aa13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 ZNF787Q6DD87 383 aa13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 GRHL2Q6ISB3 625 aa13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 C16orf47Q6ZP98 133 aaPredicted RBP13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 CCDC91Q7Z6B0 441 aa13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 MYLK4Q86YV6 388 aaPredicted RBP13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 ARMC10Q8N2F6 343 aa13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 ACOT4Q8N9L9 421 aa13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 HUS1BQ8NHY5 278 aa13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 UHMK1Q8TAS1 419 aaKnown RBP13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 SLC44A1Q8WWI5 657 aa13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 SREK1Q8WXA9 508 aaKnown RBP13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 VMP1Q96GC9 406 aa13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 FRMD6Q96NE9 622 aa13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 FMO2Q99518 471 aa13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 TBCDQ9BTW9 1192 aa13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 FUT8Q9BYC5 575 aa13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 TRIM45Q9H8W5 580 aaPredicted RBP13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 LIN28AQ9H9Z2 209 aaKnown RBP13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 ADAP2Q9NPF8 381 aa13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 CPSF2Q9P2I0 782 aaKnown RBP13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 SH3BGRL2Q9UJC5 107 aa13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 FBXW2Q9UKT8 454 aa13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 PPIEQ9UNP9 301 aaKnown RBP13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 ANGPTL3Q9Y5C1 460 aa13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 SVILO95425 2214 aa13.29□□□□□ -0.28
RPRD1B-206ENST00000495457 UNC79Q9P2D8 2635 aa13.28□□□□□ -0.28
RPRD1B-206ENST00000495457 A0A1B0GUH1 482 aa13.28□□□□□ -0.28
RPRD1B-206ENST00000495457 NME2P1O60361 137 aa13.28□□□□□ -0.28
RPRD1B-206ENST00000495457 CTNSO60931 367 aa13.28□□□□□ -0.28
RPRD1B-206ENST00000495457 LDB3O75112 727 aa13.28□□□□□ -0.28
RPRD1B-206ENST00000495457 IFNA16P05015 189 aa13.28□□□□□ -0.28
RPRD1B-206ENST00000495457 INHBAP08476 426 aa13.28□□□□□ -0.28
RPRD1B-206ENST00000495457 CTAGE8P0CG41 777 aa13.28□□□□□ -0.28
RPRD1B-206ENST00000495457 NME2P22392 152 aa13.28□□□□□ -0.28
RPRD1B-206ENST00000495457 HIST1H1TP22492 207 aaPredicted RBP13.28□□□□□ -0.28
RPRD1B-206ENST00000495457 TRHRP34981 398 aaPredicted RBP13.28□□□□□ -0.28
RPRD1B-206ENST00000495457 HLCSP50747 726 aa13.28□□□□□ -0.28
RPRD1B-206ENST00000495457 ALDH18A1P54886 795 aaKnown RBP13.28□□□□□ -0.28
RPRD1B-206ENST00000495457 PER3P56645 1201 aa13.28□□□□□ -0.28
RPRD1B-206ENST00000495457 ALDH6A1Q02252 535 aaKnown RBP13.28□□□□□ -0.28
RPRD1B-206ENST00000495457 RCN2Q14257 317 aa13.28□□□□□ -0.28
RPRD1B-206ENST00000495457 ZRSR2Q15696 482 aaKnown RBP13.28□□□□□ -0.28
RPRD1B-206ENST00000495457 AP5B1Q2VPB7 878 aa13.28□□□□□ -0.28
RPRD1B-206ENST00000495457 TMEM35AQ53FP2 167 aa13.28□□□□□ -0.28
RPRD1B-206ENST00000495457 TECRLQ5HYJ1 363 aa13.28□□□□□ -0.28
RPRD1B-206ENST00000495457 RNFT1Q5M7Z0 435 aa13.28□□□□□ -0.28
RPRD1B-206ENST00000495457 DEPDC1Q5TB30 811 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms