RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 C8orf89P0DMQ9 161 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 SFTPCP11686 197 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 RNH1P13489 461 aaKnown RBP16.11■□□□□ 0.17
SNX17-209ENST00000494893 IL10P22301 178 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 ATP5A1P25705 553 aaKnown RBP16.11■□□□□ 0.17
SNX17-209ENST00000494893 SKP1P63208 163 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 BTG2P78543 158 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 ASPHQ12797 758 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 NFATC3Q12968 1075 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 CHI3L2Q15782 390 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 LACTB2Q53H82 288 aaPredicted RBP16.11■□□□□ 0.17
SNX17-209ENST00000494893 MFSD4BQ5TF39 518 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 LIPMQ5VYY2 423 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 MILR1Q7Z6M3 343 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 ANKRD37Q7Z713 158 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 PARP9Q8IXQ6 854 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 OR6Y1Q8NGX8 325 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 MTFMTQ96DP5 389 aaKnown RBP16.11■□□□□ 0.17
SNX17-209ENST00000494893 CMTM7Q96FZ5 175 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 FAR2Q96K12 515 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 IMMP1LQ96LU5 166 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 SERINC2Q96SA4 455 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 CSF3RQ99062 836 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 NPLQ9BXD5 320 aaPredicted RBP16.11■□□□□ 0.17
SNX17-209ENST00000494893 ZNF552Q9H707 407 aaPredicted RBP16.11■□□□□ 0.17
SNX17-209ENST00000494893 ATP13A2Q9NQ11 1180 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 KCMF1Q9P0J7 381 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 ADGRE2Q9UHX3 823 aa16.11■□□□□ 0.17
SNX17-209ENST00000494893 IGKV3D-11A0A0A0MRZ8 115 aa16.1■□□□□ 0.17
SNX17-209ENST00000494893 PLPP1O14494 284 aa16.1■□□□□ 0.17
SNX17-209ENST00000494893 OR4F21O95013 312 aa16.1■□□□□ 0.17
SNX17-209ENST00000494893 OTCP00480 354 aa16.1■□□□□ 0.17
SNX17-209ENST00000494893 SERPINE1P05121 402 aa16.1■□□□□ 0.17
SNX17-209ENST00000494893 GRK2P25098 689 aa16.1■□□□□ 0.17
SNX17-209ENST00000494893 MTTPP55157 894 aa16.1■□□□□ 0.17
SNX17-209ENST00000494893 LIM2P55344 173 aa16.1■□□□□ 0.17
SNX17-209ENST00000494893 CBX1P83916 185 aa16.1■□□□□ 0.17
SNX17-209ENST00000494893 AIMP2Q13155 320 aaKnown RBP16.1■□□□□ 0.17
SNX17-209ENST00000494893 MYBPC3Q14896 1274 aa16.1■□□□□ 0.17
SNX17-209ENST00000494893 TMEM35AQ53FP2 167 aa16.1■□□□□ 0.17
SNX17-209ENST00000494893 COLEC12Q5KU26 742 aa16.1■□□□□ 0.17
SNX17-209ENST00000494893 TCHHL1Q5QJ38 904 aaPredicted RBP16.1■□□□□ 0.17
SNX17-209ENST00000494893 FRG2Q64ET8 278 aa16.1■□□□□ 0.17
SNX17-209ENST00000494893 ATG16L1Q676U5 607 aa16.1■□□□□ 0.17
SNX17-209ENST00000494893 NDUFAF7Q7L592 441 aa16.1■□□□□ 0.17
SNX17-209ENST00000494893 PTRH1Q86Y79 214 aaKnown RBP16.1■□□□□ 0.17
SNX17-209ENST00000494893 ACOT4Q8N9L9 421 aa16.1■□□□□ 0.17
SNX17-209ENST00000494893 CLEC1AQ8NC01 280 aa16.1■□□□□ 0.17
SNX17-209ENST00000494893 PPP1R14CQ8TAE6 165 aa16.1■□□□□ 0.17
SNX17-209ENST00000494893 KCNC2Q96PR1 638 aa16.1■□□□□ 0.17
SNX17-209ENST00000494893 FRG2BQ96QU4 278 aa16.1■□□□□ 0.17
SNX17-209ENST00000494893 ZNF382Q96SR6 550 aa16.1■□□□□ 0.17
SNX17-209ENST00000494893 SMAD5Q99717 465 aaKnown RBP16.1■□□□□ 0.17
SNX17-209ENST00000494893 TBCDQ9BTW9 1192 aa16.1■□□□□ 0.17
SNX17-209ENST00000494893 GATA5Q9BWX5 397 aaPredicted RBP16.1■□□□□ 0.17
SNX17-209ENST00000494893 NECTIN3Q9NQS3 549 aa16.1■□□□□ 0.17
SNX17-209ENST00000494893 FARSBQ9NSD9 589 aaKnown RBP16.1■□□□□ 0.17
SNX17-209ENST00000494893 DAPP1Q9UN19 280 aa16.1■□□□□ 0.17
SNX17-209ENST00000494893 EIF4E1BA6NMX2 242 aaKnown RBP16.09■□□□□ 0.17
SNX17-209ENST00000494893 TCP11X1B4DZS4 312 aa16.09■□□□□ 0.17
SNX17-209ENST00000494893 FOXE1O00358 373 aaPredicted RBP16.09■□□□□ 0.17
SNX17-209ENST00000494893 CYR61O00622 381 aa16.09■□□□□ 0.17
SNX17-209ENST00000494893 UBFD1O14562 309 aaKnown RBP16.09■□□□□ 0.17
SNX17-209ENST00000494893 PCDH17O14917 1159 aa16.09■□□□□ 0.17
SNX17-209ENST00000494893 B3GALT2O43825 422 aa16.09■□□□□ 0.17
SNX17-209ENST00000494893 MAOAP21397 527 aa16.09■□□□□ 0.17
SNX17-209ENST00000494893 HIST1H1TP22492 207 aaPredicted RBP16.09■□□□□ 0.17
SNX17-209ENST00000494893 BSGP35613 385 aa16.09■□□□□ 0.17
SNX17-209ENST00000494893 ARL1P40616 181 aaPredicted RBP16.09■□□□□ 0.17
SNX17-209ENST00000494893 RAB38P57729 211 aa16.09■□□□□ 0.17
SNX17-209ENST00000494893 STX3Q13277 289 aa16.09■□□□□ 0.17
SNX17-209ENST00000494893 ABRAXAS2Q15018 415 aa16.09■□□□□ 0.17
SNX17-209ENST00000494893 QSOX2Q6ZRP7 698 aa16.09■□□□□ 0.17
SNX17-209ENST00000494893 ASB18Q6ZVZ8 466 aa16.09■□□□□ 0.17
SNX17-209ENST00000494893 CHSY3Q70JA7 882 aa16.09■□□□□ 0.17
SNX17-209ENST00000494893 CPEB2Q7Z5Q1 589 aaKnown RBP16.09■□□□□ 0.17
SNX17-209ENST00000494893 SCUBE1Q8IWY4 988 aa16.09■□□□□ 0.17
SNX17-209ENST00000494893 PSMF1Q92530 271 aa16.09■□□□□ 0.17
SNX17-209ENST00000494893 ZNF317Q96PQ6 595 aaPredicted RBP16.09■□□□□ 0.17
SNX17-209ENST00000494893 MAPKAP1Q9BPZ7 522 aa16.09■□□□□ 0.17
SNX17-209ENST00000494893 ZBTB20Q9HC78 741 aaPredicted RBP16.09■□□□□ 0.17
SNX17-209ENST00000494893 PSD3Q9NYI0 1048 aa16.09■□□□□ 0.17
SNX17-209ENST00000494893 GPR83Q9NYM4 423 aa16.09■□□□□ 0.17
SNX17-209ENST00000494893 TRPS1Q9UHF7 1281 aa16.09■□□□□ 0.17
SNX17-209ENST00000494893 PPT2Q9UMR5 302 aa16.09■□□□□ 0.17
SNX17-209ENST00000494893 TNRC6AQ8NDV7 1962 aaKnown RBP16.08■□□□□ 0.16
SNX17-209ENST00000494893 NSG1A0A0A6YYJ2 146 aa16.08■□□□□ 0.16
SNX17-209ENST00000494893 EEDO75530 441 aaKnown RBP16.08■□□□□ 0.16
SNX17-209ENST00000494893 SEC24DO94855 1032 aaPredicted RBP16.08■□□□□ 0.16
SNX17-209ENST00000494893 ITGA3P26006 1051 aa16.08■□□□□ 0.16
SNX17-209ENST00000494893 PTX3P26022 381 aaPredicted RBP16.08■□□□□ 0.16
SNX17-209ENST00000494893 HTR6P50406 440 aa16.08■□□□□ 0.16
SNX17-209ENST00000494893 NAGLUP54802 743 aa16.08■□□□□ 0.16
SNX17-209ENST00000494893 BST1Q10588 318 aa16.08■□□□□ 0.16
SNX17-209ENST00000494893 CUL3Q13618 768 aa16.08■□□□□ 0.16
SNX17-209ENST00000494893 NSDHLQ15738 373 aa16.08■□□□□ 0.16
SNX17-209ENST00000494893 CES4AQ5XG92 561 aa16.08■□□□□ 0.16
SNX17-209ENST00000494893 OR4C11Q6IEV9 310 aa16.08■□□□□ 0.16
SNX17-209ENST00000494893 ZCCHC23Q6ZST2 131 aa16.08■□□□□ 0.16
SNX17-209ENST00000494893 FAM47BQ8NA70 645 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms