RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 CCR8P51685 355 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 NR1H2P55055 460 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 RPA4Q13156 261 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 KRT33BQ14525 404 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 C18orf63Q68DL7 685 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 OR2T5Q6IEZ7 315 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 KLHL17Q6TDP4 642 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 ABRAXAS1Q6UWZ7 409 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 SZRD1Q7Z422 152 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 DEFB119Q8N690 84 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 KCT2Q8NC54 265 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 ABHD11Q8NFV4 315 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 OR2T29Q8NH02 315 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 SPPL2AQ8TCT8 520 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 SETD7Q8WTS6 366 aaKnown RBP9.89□□□□□ -0.83
SAMM50-206ENST00000494795 RLN3Q8WXF3 142 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 SMPDL3AQ92484 453 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 DGCR14Q96DF8 476 aaKnown RBP9.89□□□□□ -0.83
SAMM50-206ENST00000494795 ASPSCR1Q9BZE9 553 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 ZNF576Q9H609 170 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 C6orf106Q9H6K1 298 aaPredicted RBP9.89□□□□□ -0.83
SAMM50-206ENST00000494795 KCNK12Q9HB15 430 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 MYNNQ9NPC7 610 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 LMCD1Q9NZU5 365 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 SH3GLB1Q9Y371 365 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 CCDC85CA6NKD9 419 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 PTGES3LE9PB15 166 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 FABP3P05413 133 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 FMO3P31513 532 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 CHI3L1P36222 383 aaPredicted RBP9.89□□□□□ -0.83
SAMM50-206ENST00000494795 PIK3CBP42338 1070 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 TPMTP51580 245 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 LSM11P83369 360 aaKnown RBP eCLIP9.89□□□□□ -0.83
SAMM50-206ENST00000494795 PRDX1Q06830 199 aaKnown RBP9.89□□□□□ -0.83
SAMM50-206ENST00000494795 SRSF5Q13243 272 aaKnown RBP9.89□□□□□ -0.83
SAMM50-206ENST00000494795 MAPK11Q15759 364 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 KCTD8Q6ZWB6 473 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 RBM45Q8IUH3 476 aaKnown RBP9.89□□□□□ -0.83
SAMM50-206ENST00000494795 SMRP1Q8NCR6 262 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 REPS1Q96D71 796 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 WASH6PQ9NQA3 447 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 TAS2R9Q9NYW1 312 aa9.89□□□□□ -0.83
SAMM50-206ENST00000494795 NDRG2Q9UN36 371 aaKnown RBP9.89□□□□□ -0.83
SAMM50-206ENST00000494795 SAMHD1Q9Y3Z3 626 aaKnown RBP9.89□□□□□ -0.83
SAMM50-206ENST00000494795 LOC100130705A0A1B0GUX0 176 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 TCRBV21S2A2A0A5A6 115 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 NTN1O95631 604 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 EEF1B2P24534 225 aaKnown RBP9.88□□□□□ -0.83
SAMM50-206ENST00000494795 RRM2P31350 389 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 TNFRSF4P43489 277 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 PXNP49023 591 aaPredicted RBP9.88□□□□□ -0.83
SAMM50-206ENST00000494795 PPP1CAP62136 330 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 REEP5Q00765 189 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 EEF1A2Q05639 463 aaKnown RBP9.88□□□□□ -0.83
SAMM50-206ENST00000494795 CCDC85BQ15834 202 aaPredicted RBP9.88□□□□□ -0.83
SAMM50-206ENST00000494795 KIAA1161Q6NSJ0 714 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 EIF3MQ7L2H7 374 aaKnown RBP9.88□□□□□ -0.83
SAMM50-206ENST00000494795 ARL10Q8N8L6 244 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 CHDHQ8NE62 594 aaPredicted RBP9.88□□□□□ -0.83
SAMM50-206ENST00000494795 TNIP2Q8NFZ5 429 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 OR52E4Q8NGH9 312 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 OR5K1Q8NHB7 308 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 BHLHE41Q9C0J9 482 aaPredicted RBP9.88□□□□□ -0.83
SAMM50-206ENST00000494795 POLR1BQ9H9Y6 1135 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 RASSF1Q9NS23 344 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 SIRT3Q9NTG7 399 aaPredicted RBP9.88□□□□□ -0.83
SAMM50-206ENST00000494795 NDUFAF4Q9P032 175 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 ZMIZ1Q9ULJ6 1067 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 ATG4BQ9Y4P1 393 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 LRIT2A6NDA9 550 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 NDUFS4O43181 175 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 CTSBP07858 339 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 RAB28P51157 221 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 SCARB2Q14108 478 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 GPR19Q15760 415 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 FREM2Q5SZK8 3169 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 AP1ARQ63HQ0 302 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 TMEM26Q6ZUK4 368 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 ADHFE1Q8IWW8 467 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 EID3Q8N140 333 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 KRT78Q8N1N4 520 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 SLC44A3Q8N4M1 653 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 MAGEB10Q96LZ2 347 aaPredicted RBP9.88□□□□□ -0.83
SAMM50-206ENST00000494795 AIF1LQ9BQI0 150 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 HAUS8Q9BT25 410 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 DCUN1D5Q9BTE7 237 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 THUMPD1Q9NXG2 353 aaKnown RBP9.88□□□□□ -0.83
SAMM50-206ENST00000494795 FBXW2Q9UKT8 454 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 RAB23Q9ULC3 237 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 SAMD4AQ9UPU9 718 aaKnown RBP9.88□□□□□ -0.83
SAMM50-206ENST00000494795 FANCMQ8IYD8 2048 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 CELSR3Q9NYQ7 3312 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 ANHXE9PGG2 379 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 HCRTR1O43613 425 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 PRICKLE3O43900 615 aaPredicted RBP9.88□□□□□ -0.83
SAMM50-206ENST00000494795 RASGRP1O95267 797 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 ZBTB11O95625 1053 aaPredicted RBP9.88□□□□□ -0.83
SAMM50-206ENST00000494795 FESP07332 822 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 GABRG2P18507 467 aa9.88□□□□□ -0.83
SAMM50-206ENST00000494795 MATN1P21941 496 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms