RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 KCTD11Q693B1 232 aa3.76□□□□□ -1.81
SMC4-224ENST00000494612 TCEAL6Q6IPX3 200 aa3.76□□□□□ -1.81
SMC4-224ENST00000494612 RAPH1Q70E73 1250 aa3.76□□□□□ -1.81
SMC4-224ENST00000494612 SIAH3Q8IW03 269 aa3.76□□□□□ -1.81
SMC4-224ENST00000494612 SERPINA12Q8IW75 414 aa3.76□□□□□ -1.81
SMC4-224ENST00000494612 WDSUB1Q8N9V3 476 aa3.76□□□□□ -1.81
SMC4-224ENST00000494612 AQP11Q8NBQ7 271 aa3.76□□□□□ -1.81
SMC4-224ENST00000494612 SPATA18Q8TC71 538 aa3.76□□□□□ -1.81
SMC4-224ENST00000494612 GGHQ92820 318 aa3.76□□□□□ -1.81
SMC4-224ENST00000494612 ATXN7L3BQ96GX2 97 aa3.76□□□□□ -1.81
SMC4-224ENST00000494612 C18orf12Q96KH6 178 aa3.76□□□□□ -1.81
SMC4-224ENST00000494612 PCDHB18PQ96TA0 734 aa3.76□□□□□ -1.81
SMC4-224ENST00000494612 ACAT2Q9BWD1 397 aa3.76□□□□□ -1.81
SMC4-224ENST00000494612 ZNF665Q9H7R5 613 aa3.76□□□□□ -1.81
SMC4-224ENST00000494612 BARHL2Q9NY43 387 aa3.76□□□□□ -1.81
SMC4-224ENST00000494612 MYH14Q7Z406 1995 aaKnown RBP3.76□□□□□ -1.81
SMC4-224ENST00000494612 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.75□□□□□ -1.81
SMC4-224ENST00000494612 C3P01024 1663 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 COL2A1P02458 1487 aaPredicted RBP3.75□□□□□ -1.81
SMC4-224ENST00000494612 C2orf92A0A1B0GVN3 265 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 ANHXE9PGG2 379 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 CACNB4O00305 520 aaPredicted RBP3.75□□□□□ -1.81
SMC4-224ENST00000494612 PSMD3O43242 534 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 TLX2O43763 284 aaPredicted RBP3.75□□□□□ -1.81
SMC4-224ENST00000494612 KERAO60938 352 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 GAS8O95995 478 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 ODC1P11926 461 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 P4HA1P13674 534 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 TYMPP19971 482 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 C4BPBP20851 252 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 UCP2P55851 309 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 EVCP57679 992 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 KIAA1024LP59773 190 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 IRX4P78413 519 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 UBXN1Q04323 297 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 SLC3A1Q07837 685 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 TEFQ10587 303 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 RPA4Q13156 261 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 GRB14Q14449 540 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 MORF4L2Q15014 288 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 FASTKD1Q53R41 847 aaKnown RBP3.75□□□□□ -1.81
SMC4-224ENST00000494612 KIF6Q6ZMV9 814 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 Q6ZVQ6 151 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 LAX1Q8IWV1 398 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 DND1Q8IYX4 353 aaKnown RBP3.75□□□□□ -1.81
SMC4-224ENST00000494612 RNF149Q8NC42 400 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 NEK11Q8NG66 645 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 OR52B6Q8NGF0 335 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 SPATA13Q96N96 652 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 SYT11Q9BT88 431 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 PAPOLGQ9BWT3 736 aaKnown RBP3.75□□□□□ -1.81
SMC4-224ENST00000494612 MED20Q9H944 212 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 NLGN3Q9NZ94 848 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 NUDT4Q9NZJ9 180 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 AKAP7Q9P0M2 348 aaPredicted RBP3.75□□□□□ -1.81
SMC4-224ENST00000494612 PILRAQ9UKJ1 303 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 EXOC6BQ9Y2D4 811 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 SCAPERQ9BY12 1400 aa3.75□□□□□ -1.81
SMC4-224ENST00000494612 NUP153P49790 1475 aaKnown RBP3.74□□□□□ -1.81
SMC4-224ENST00000494612 CAMSAP1Q5T5Y3 1602 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 TCP10L2B9ZVM9 353 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 LMO7DNF2Z398 122 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 CHUKO15111 745 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 RTN2O75298 545 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 LYNP07948 512 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 SELEP16581 610 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 ACKR3P25106 362 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 KHKP50053 298 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 GALK2Q01415 458 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 PMP22Q01453 160 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 GFPT1Q06210 699 aaPredicted RBP3.74□□□□□ -1.81
SMC4-224ENST00000494612 NPRL3Q12980 569 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 LCP2Q13094 533 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 LASP1Q14847 261 aaKnown RBP3.74□□□□□ -1.81
SMC4-224ENST00000494612 NCOA1Q15788 1441 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 C3AR1Q16581 482 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 MTHFSDQ2M296 383 aaKnown RBP3.74□□□□□ -1.81
SMC4-224ENST00000494612 HFEQ30201 348 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 SAMD9Q5K651 1589 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 ZNF776Q68DI1 518 aaPredicted RBP3.74□□□□□ -1.81
SMC4-224ENST00000494612 ZNF497Q6ZNH5 498 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 TOM1L2Q6ZVM7 507 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 SUPT6HQ7KZ85 1726 aaKnown RBP3.74□□□□□ -1.81
SMC4-224ENST00000494612 PRSS42Q7Z5A4 293 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 KRTAP7-1Q8IUC3 87 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 SLC22A15Q8IZD6 547 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 OR9Q2Q8NGE9 314 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 ULK4Q96C45 1275 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 C5orf30Q96GV9 206 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 PDLIM5Q96HC4 596 aaKnown RBP3.74□□□□□ -1.81
SMC4-224ENST00000494612 POM121L2Q96KW2 1035 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 ERGIC2Q96RQ1 377 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 ASCL2Q99929 193 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 DDX50Q9BQ39 737 aaKnown RBP3.74□□□□□ -1.81
SMC4-224ENST00000494612 NTMT1Q9BV86 223 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 NAPBQ9H115 298 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 MID1IP1Q9NPA3 183 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 DNAJC11Q9NVH1 559 aa3.74□□□□□ -1.81
SMC4-224ENST00000494612 TEX10Q9NXF1 929 aaPredicted RBP3.74□□□□□ -1.81
SMC4-224ENST00000494612 ASIC3Q9UHC3 531 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms