RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 VMP1Q96GC9 406 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 FRMD6Q96NE9 622 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 CSF3RQ99062 836 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 TSPAN10Q9H1Z9 355 aaPredicted RBP12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 IGSF5Q9NSI5 407 aa12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 PTBP2Q9UKA9 531 aaKnown RBP12.51□□□□□ -0.41
CTDSP1-212ENST00000494067 MYOCOSA0A1B0GUC4 107 aa12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 PRRG2O14669 202 aa12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 PRKNO60260 465 aaPredicted RBP12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 ZFAND5O76080 213 aa12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 IFNA16P05015 189 aa12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 CERS1P27544 350 aa12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 TRHRP34981 398 aaPredicted RBP12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 ETF1P62495 437 aaKnown RBP12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 IRF9Q00978 393 aa12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 SLC7A5Q01650 507 aa12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 IRF8Q02556 426 aa12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 BMPR2Q13873 1038 aa12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 DOC2AQ14183 400 aa12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 ADPRMQ3LIE5 342 aa12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 RNFT1Q5M7Z0 435 aa12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 UBE3DQ7Z6J8 389 aa12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 TBC1D1Q86TI0 1168 aaPredicted RBP12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 CCDC25Q86WR0 208 aa12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 CHERPQ8IWX8 916 aaKnown RBP12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 TMEM132CQ8N3T6 1108 aa12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 RNF175Q8N4F7 328 aa12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 FAM47BQ8NA70 645 aa12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 APCDD1LQ8NCL9 501 aa12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 FBF1Q8TES7 1133 aa12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 DAZLQ92904 295 aaKnown RBP12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 EXT2Q93063 718 aa12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 KIAA1191Q96A73 305 aa12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 WDR34Q96EX3 536 aa12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 ATOH8Q96SQ7 321 aa12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 TRIM45Q9H8W5 580 aaPredicted RBP12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 CLCA3PQ9Y6N3 262 aa12.5□□□□□ -0.41
CTDSP1-212ENST00000494067 TFECO14948 347 aaPredicted RBP12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 TNNI3P19429 210 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 AGAP20933 346 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 HTR1EP28566 365 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 STX2P32856 288 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 MAGEA4P43358 317 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 GPR143P51810 404 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 NR0B1P51843 470 aaKnown RBP12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 STX4Q12846 297 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 E2F2Q14209 437 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 SLMAPQ14BN4 828 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 C3AR1Q16581 482 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 ZNF793Q6ZN11 406 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 C16orf47Q6ZP98 133 aaPredicted RBP12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 Q6ZPB1 254 aaPredicted RBP12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 NCCRP1Q6ZVX7 275 aaPredicted RBP12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 CHSY3Q70JA7 882 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 LRRC70Q7Z2Q7 622 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 ISCA2Q86U28 154 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 SIAH3Q8IW03 269 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 GPALPP1Q8IXQ4 340 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 SRRM1Q8IYB3 904 aaKnown RBP12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 CENPLQ8N0S6 344 aaPredicted RBP12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 CYP4Z2PQ8N1L4 340 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 PPM1NQ8N819 430 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 KCNC2Q96PR1 638 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 PHACTR1Q9C0D0 580 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 ALG9Q9H6U8 611 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 NMRAL1Q9HBL8 299 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 ADAP2Q9NPF8 381 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 TIMMDC1Q9NPL8 285 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 ZDHHC18Q9NUE0 388 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 TINAGQ9UJW2 476 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 ERVK-11Q9UQG0 969 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 ZNF835Q9Y2P0 537 aa12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 YARS2Q9Y2Z4 477 aaKnown RBP12.49□□□□□ -0.41
CTDSP1-212ENST00000494067 ITPR2Q14571 2701 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 LRRC14BA6NHZ5 514 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 TMEM200CA6NKL6 621 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 A8MVJ9 347 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 UBXN8O00124 270 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 RTCAO00442 366 aaKnown RBP12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 CYR61O00622 381 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 CTNSO60931 367 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 ITGA10O75578 1167 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 MTHFD2P13995 350 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 COX6B1P14854 86 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 TFEBP19484 476 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 GRNP28799 593 aaKnown RBP12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 CRABP2P29373 138 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 SERPINB1P30740 379 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 PTGER4P35408 488 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 MSH2P43246 934 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 SSR4P51571 173 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 LIM2P55344 173 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 HSF1Q00613 529 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 CHIT1Q13231 466 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 SERTAD2Q14140 314 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 CDSNQ15517 529 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 ELAVL1Q15717 326 aaKnown RBP12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 ZNF630Q2M218 657 aaPredicted RBP12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 AP5B1Q2VPB7 878 aa12.48□□□□□ -0.41
CTDSP1-212ENST00000494067 FAM219BQ5XKK7 198 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms