RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 PWWP2AQ96N64 755 aa16.38■□□□□ 0.21
NUP50-218ENST00000493456 SERPINB12Q96P63 405 aa16.38■□□□□ 0.21
NUP50-218ENST00000493456 NDNQ99608 321 aa16.38■□□□□ 0.21
NUP50-218ENST00000493456 NPLQ9BXD5 320 aaPredicted RBP16.38■□□□□ 0.21
NUP50-218ENST00000493456 KLHL31Q9H511 634 aa16.38■□□□□ 0.21
NUP50-218ENST00000493456 PRTFDC1Q9NRG1 225 aa16.38■□□□□ 0.21
NUP50-218ENST00000493456 MRPS33Q9Y291 106 aaKnown RBP16.38■□□□□ 0.21
NUP50-218ENST00000493456 DYRK1BQ9Y463 629 aa16.38■□□□□ 0.21
NUP50-218ENST00000493456 C4orf51C9J302 202 aa16.37■□□□□ 0.21
NUP50-218ENST00000493456 HCN1O60741 890 aa16.37■□□□□ 0.21
NUP50-218ENST00000493456 FGGP02679 453 aa16.37■□□□□ 0.21
NUP50-218ENST00000493456 ENO2P09104 434 aaPredicted RBP16.37■□□□□ 0.21
NUP50-218ENST00000493456 VPS41P49754 854 aa16.37■□□□□ 0.21
NUP50-218ENST00000493456 STXBP1P61764 594 aaKnown RBP16.37■□□□□ 0.21
NUP50-218ENST00000493456 LTBQ06643 244 aa16.37■□□□□ 0.21
NUP50-218ENST00000493456 SLC13A2Q13183 592 aa16.37■□□□□ 0.21
NUP50-218ENST00000493456 TRIP13Q15645 432 aaPredicted RBP16.37■□□□□ 0.21
NUP50-218ENST00000493456 ELAVL1Q15717 326 aaKnown RBP16.37■□□□□ 0.21
NUP50-218ENST00000493456 HSP90AA5PQ58FG0 334 aa16.37■□□□□ 0.21
NUP50-218ENST00000493456 TOR1AIP1Q5JTV8 583 aa16.37■□□□□ 0.21
NUP50-218ENST00000493456 HSDL2Q6YN16 418 aa16.37■□□□□ 0.21
NUP50-218ENST00000493456 FAM47EQ6ZV65 393 aa16.37■□□□□ 0.21
NUP50-218ENST00000493456 C2CD4AQ8NCU7 369 aaPredicted RBP16.37■□□□□ 0.21
NUP50-218ENST00000493456 GABPB2Q8TAK5 448 aaPredicted RBP16.37■□□□□ 0.21
NUP50-218ENST00000493456 GAL3ST3Q96A11 431 aa16.37■□□□□ 0.21
NUP50-218ENST00000493456 FAR2Q96K12 515 aa16.37■□□□□ 0.21
NUP50-218ENST00000493456 TSNARE1Q96NA8 513 aa16.37■□□□□ 0.21
NUP50-218ENST00000493456 LDAHQ9H6V9 325 aa16.37■□□□□ 0.21
NUP50-218ENST00000493456 LIN28AQ9H9Z2 209 aaKnown RBP16.37■□□□□ 0.21
NUP50-218ENST00000493456 PCDHGB3Q9Y5G1 929 aa16.37■□□□□ 0.21
NUP50-218ENST00000493456 CLDN16Q9Y5I7 305 aa16.37■□□□□ 0.21
NUP50-218ENST00000493456 A0A088AWK7 358 aa16.36■□□□□ 0.21
NUP50-218ENST00000493456 CTAGE15A4D2H0 777 aa16.36■□□□□ 0.21
NUP50-218ENST00000493456 G3V3Y1 287 aa16.36■□□□□ 0.21
NUP50-218ENST00000493456 TGFBR3LH3BV60 316 aa16.36■□□□□ 0.21
NUP50-218ENST00000493456 WWP2O00308 870 aa16.36■□□□□ 0.21
NUP50-218ENST00000493456 SYT5O00445 386 aa16.36■□□□□ 0.21
NUP50-218ENST00000493456 RAF1P04049 648 aa16.36■□□□□ 0.21
NUP50-218ENST00000493456 ZNF10P21506 573 aaPredicted RBP16.36■□□□□ 0.21
NUP50-218ENST00000493456 PPP2R1BP30154 601 aa16.36■□□□□ 0.21
NUP50-218ENST00000493456 UQCRC1P31930 480 aa16.36■□□□□ 0.21
NUP50-218ENST00000493456 RAB38P57729 211 aa16.36■□□□□ 0.21
NUP50-218ENST00000493456 IL2P60568 153 aa16.36■□□□□ 0.21
NUP50-218ENST00000493456 BTN3A2P78410 334 aa16.36■□□□□ 0.21
NUP50-218ENST00000493456 BMPR2Q13873 1038 aa16.36■□□□□ 0.21
NUP50-218ENST00000493456 SLC10A1Q14973 349 aa16.36■□□□□ 0.21
NUP50-218ENST00000493456 RBBP5Q15291 538 aaKnown RBP16.36■□□□□ 0.21
NUP50-218ENST00000493456 NXPE4Q6UWF7 544 aa16.36■□□□□ 0.21
NUP50-218ENST00000493456 TMPRSS11BQ86T26 416 aa16.36■□□□□ 0.21
NUP50-218ENST00000493456 CTAGE6Q86UF2 777 aa16.36■□□□□ 0.21
NUP50-218ENST00000493456 ZNF595Q8IYB9 648 aa16.36■□□□□ 0.21
NUP50-218ENST00000493456 DAZLQ92904 295 aaKnown RBP16.36■□□□□ 0.21
NUP50-218ENST00000493456 SCYL1Q96KG9 808 aa16.36■□□□□ 0.21
NUP50-218ENST00000493456 IARS2Q9NSE4 1012 aaKnown RBP16.36■□□□□ 0.21
NUP50-218ENST00000493456 SACM1LQ9NTJ5 587 aa16.36■□□□□ 0.21
NUP50-218ENST00000493456 CLCA3PQ9Y6N3 262 aa16.36■□□□□ 0.21
NUP50-218ENST00000493456 ATP6AP2A0A1C7CYW4 349 aa16.35■□□□□ 0.21
NUP50-218ENST00000493456 HSPB2A8KAH6 182 aa16.35■□□□□ 0.21
NUP50-218ENST00000493456 ATP6AP2O75787 350 aa16.35■□□□□ 0.21
NUP50-218ENST00000493456 P04436 131 aa16.35■□□□□ 0.21
NUP50-218ENST00000493456 MAGEA3P43357 314 aa16.35■□□□□ 0.21
NUP50-218ENST00000493456 HK2P52789 917 aa16.35■□□□□ 0.21
NUP50-218ENST00000493456 CDKN2DP55273 166 aa16.35■□□□□ 0.21
NUP50-218ENST00000493456 CCZ1BP86790 482 aa16.35■□□□□ 0.21
NUP50-218ENST00000493456 CCZ1P86791 482 aaPredicted RBP16.35■□□□□ 0.21
NUP50-218ENST00000493456 FOXO1Q12778 655 aa16.35■□□□□ 0.21
NUP50-218ENST00000493456 SNTB1Q13884 538 aaKnown RBP16.35■□□□□ 0.21
NUP50-218ENST00000493456 HSPB2Q16082 182 aa16.35■□□□□ 0.21
NUP50-218ENST00000493456 ZNF750Q32MQ0 723 aa16.35■□□□□ 0.21
NUP50-218ENST00000493456 MORN4Q8NDC4 146 aa16.35■□□□□ 0.21
NUP50-218ENST00000493456 TTLQ8NG68 377 aa16.35■□□□□ 0.21
NUP50-218ENST00000493456 OR8K3Q8NH51 312 aa16.35■□□□□ 0.21
NUP50-218ENST00000493456 SLCO2A1Q92959 643 aa16.35■□□□□ 0.21
NUP50-218ENST00000493456 AICDAQ9GZX7 198 aa16.35■□□□□ 0.21
NUP50-218ENST00000493456 DMRT3Q9NQL9 472 aa16.35■□□□□ 0.21
NUP50-218ENST00000493456 CBLCQ9ULV8 474 aa16.35■□□□□ 0.21
NUP50-218ENST00000493456 GUCA1BQ9UMX6 200 aa16.35■□□□□ 0.21
NUP50-218ENST00000493456 TRGV5A0A0B4J1U4 118 aa16.34■□□□□ 0.21
NUP50-218ENST00000493456 GOLGA8MH3BSY2 632 aa16.34■□□□□ 0.21
NUP50-218ENST00000493456 DVL2O14641 736 aa16.34■□□□□ 0.21
NUP50-218ENST00000493456 GUCA1CO95843 209 aa16.34■□□□□ 0.21
NUP50-218ENST00000493456 CELA3AP09093 270 aa16.34■□□□□ 0.21
NUP50-218ENST00000493456 SAT1P21673 171 aa16.34■□□□□ 0.21
NUP50-218ENST00000493456 ASCL1P50553 236 aa16.34■□□□□ 0.21
NUP50-218ENST00000493456 PDAP1Q13442 181 aaKnown RBP16.34■□□□□ 0.21
NUP50-218ENST00000493456 RUNX2Q13950 521 aa16.34■□□□□ 0.21
NUP50-218ENST00000493456 DAZAP2Q15038 168 aaPredicted RBP16.34■□□□□ 0.21
NUP50-218ENST00000493456 KCTD19Q17RG1 926 aaPredicted RBP16.34■□□□□ 0.21
NUP50-218ENST00000493456 DEFB113Q30KQ7 82 aa16.34■□□□□ 0.21
NUP50-218ENST00000493456 OPN5Q6U736 354 aa16.34■□□□□ 0.21
NUP50-218ENST00000493456 THOC6Q86W42 341 aaKnown RBP16.34■□□□□ 0.21
NUP50-218ENST00000493456 FBXW8Q8N3Y1 598 aa16.34■□□□□ 0.21
NUP50-218ENST00000493456 OR14A16Q8NHC5 309 aa16.34■□□□□ 0.21
NUP50-218ENST00000493456 C18orf12Q96KH6 178 aa16.34■□□□□ 0.21
NUP50-218ENST00000493456 EXO5Q9H790 373 aa16.34■□□□□ 0.21
NUP50-218ENST00000493456 ALKBH4Q9NXW9 302 aa16.34■□□□□ 0.21
NUP50-218ENST00000493456 FOXD3Q9UJU5 478 aaPredicted RBP16.34■□□□□ 0.21
NUP50-218ENST00000493456 ATG4BQ9Y4P1 393 aa16.34■□□□□ 0.21
NUP50-218ENST00000493456 KCNE2Q9Y6J6 123 aa16.34■□□□□ 0.21
NUP50-218ENST00000493456 ERI3O43414 337 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms