RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 FGD2Q7Z6J4 655 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 ADAMTSL2Q86TH1 951 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 CEP97Q8IW35 865 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 SULF2Q8IWU5 870 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 ZNF595Q8IYB9 648 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 KRT78Q8N1N4 520 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 CA13Q8N1Q1 262 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 TCAIMQ8N3R3 496 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 TMEM132CQ8N3T6 1108 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 TMEM156Q8N614 296 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 CPSF7Q8N684 471 aaKnown RBP8.52□□□□□ -1.05
HDAC3-212ENST00000492407 AMER2Q8N7J2 671 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 OR8K3Q8NH51 312 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 KIAA1191Q96A73 305 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 VPS39Q96JC1 886 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 CCDC77Q9BR77 488 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 RBCK1Q9BYM8 510 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 TP63Q9H3D4 680 aaPredicted RBP8.52□□□□□ -1.05
HDAC3-212ENST00000492407 TIMMDC1Q9NPL8 285 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 NECTIN3Q9NQS3 549 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 GPRC5BQ9NZH0 403 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 ASIC3Q9UHC3 531 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 SLC22A14Q9Y267 594 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 OARD1Q9Y530 152 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 TACC2O95359 2948 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 SVILO95425 2214 aa8.52□□□□□ -1.05
HDAC3-212ENST00000492407 LRIT2A6NDA9 550 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 C19orf84I3L1E1 186 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 TFECO14948 347 aaPredicted RBP8.51□□□□□ -1.05
HDAC3-212ENST00000492407 ITGA10O75578 1167 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 CLEC3AO75596 197 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 GUCA1CO95843 209 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 TUBB4AP04350 444 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 IGFBP2P18065 325 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 MAOAP21397 527 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 CHRNB4P30926 498 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 GGT5P36269 586 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 SLC6A12P48065 614 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 MEOX1P50221 254 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 SSR4P51571 173 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 PSMD7P51665 324 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 RAB38P57729 211 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 RAB8AP61006 207 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 OLR1P78380 273 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 BTN3A2P78410 334 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 BIKQ13323 160 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 SLMAPQ14BN4 828 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 EFTUD2Q15029 972 aaKnown RBP eCLIP8.51□□□□□ -1.057e-11■■■□□ 17.5
HDAC3-212ENST00000492407 TESK1Q15569 626 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 ELAVL1Q15717 326 aaKnown RBP8.51□□□□□ -1.05
HDAC3-212ENST00000492407 MSS51Q4VC12 460 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 CMPK2Q5EBM0 449 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 TOR1AIP1Q5JTV8 583 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 TMIGD1Q6UXZ0 262 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 SLCO4C1Q6ZQN7 724 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 ACAD11Q709F0 780 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 CYP4Z2PQ8N1L4 340 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 KIF2BQ8N4N8 673 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 MORN4Q8NDC4 146 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 SRFBP1Q8NEF9 429 aaKnown RBP8.51□□□□□ -1.05
HDAC3-212ENST00000492407 LILRB4Q8NHJ6 448 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 DAZLQ92904 295 aaKnown RBP8.51□□□□□ -1.05
HDAC3-212ENST00000492407 ROGDIQ9GZN7 287 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 TSPAN10Q9H1Z9 355 aaPredicted RBP8.51□□□□□ -1.05
HDAC3-212ENST00000492407 SPNS1Q9H2V7 528 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 VCX3BQ9H321 246 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 CNOT10Q9H9A5 744 aaKnown RBP8.51□□□□□ -1.05
HDAC3-212ENST00000492407 PLAC1Q9HBJ0 212 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 ADAP2Q9NPF8 381 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 PPANQ9NQ55 473 aaKnown RBP8.51□□□□□ -1.05
HDAC3-212ENST00000492407 TCF7L2Q9NQB0 619 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 PSD3Q9NYI0 1048 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 ZNF69Q9UC07 566 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 PPT2Q9UMR5 302 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 SNX12Q9UMY4 172 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 TEX264Q9Y6I9 313 aa8.51□□□□□ -1.05
HDAC3-212ENST00000492407 DCHS2Q6V1P9 2916 aa8.5□□□□□ -1.05
HDAC3-212ENST00000492407 MYO7BQ6PIF6 2116 aa8.5□□□□□ -1.05
HDAC3-212ENST00000492407 TRBV11-1A0A0K0K1C0 115 aa8.5□□□□□ -1.05
HDAC3-212ENST00000492407 A0A1B0GTH9 108 aa8.5□□□□□ -1.05
HDAC3-212ENST00000492407 OR14I1A6ND48 311 aa8.5□□□□□ -1.05
HDAC3-212ENST00000492407 ZSCAN12O43309 604 aa8.5□□□□□ -1.05
HDAC3-212ENST00000492407 B3GALT2O43825 422 aa8.5□□□□□ -1.05
HDAC3-212ENST00000492407 CTNSO60931 367 aa8.5□□□□□ -1.05
HDAC3-212ENST00000492407 ANKRD17O75179 2603 aaKnown RBP8.5□□□□□ -1.05
HDAC3-212ENST00000492407 MYO1DO94832 1006 aa8.5□□□□□ -1.05
HDAC3-212ENST00000492407 SNRPB2P08579 225 aaKnown RBP8.5□□□□□ -1.05
HDAC3-212ENST00000492407 HOXD4P09016 255 aaPredicted RBP8.5□□□□□ -1.05
HDAC3-212ENST00000492407 TCP1P17987 556 aaKnown RBP8.5□□□□□ -1.05
HDAC3-212ENST00000492407 PTGER1P34995 402 aa8.5□□□□□ -1.05
HDAC3-212ENST00000492407 ELK3P41970 407 aa8.5□□□□□ -1.05
HDAC3-212ENST00000492407 ARL4CP56559 192 aa8.5□□□□□ -1.05
HDAC3-212ENST00000492407 TLE4Q04727 773 aa8.5□□□□□ -1.05
HDAC3-212ENST00000492407 TGM3Q08188 693 aa8.5□□□□□ -1.05
HDAC3-212ENST00000492407 MGAT5Q09328 741 aa8.5□□□□□ -1.05
HDAC3-212ENST00000492407 TBL3Q12788 808 aaKnown RBP8.5□□□□□ -1.05
HDAC3-212ENST00000492407 RUNX2Q13950 521 aa8.5□□□□□ -1.05
HDAC3-212ENST00000492407 SERTAD2Q14140 314 aa8.5□□□□□ -1.05
HDAC3-212ENST00000492407 CDSNQ15517 529 aa8.5□□□□□ -1.05
HDAC3-212ENST00000492407 KCTD19Q17RG1 926 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms