RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 NARSO43776 548 aaKnown RBP11.88□□□□□ -0.51
HMGN1-220ENST00000492280 SH3BP5O60239 455 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 LCMT2O60294 686 aaKnown RBP11.88□□□□□ -0.51
HMGN1-220ENST00000492280 TPST2O60704 377 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 GPR37L1O60883 481 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 CLPXO76031 633 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 SOX14O95416 240 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 RECKO95980 971 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 HNRNPA1P09651 372 aaKnown RBP eCLIP11.88□□□□□ -0.51
HMGN1-220ENST00000492280 ITIH1P19827 911 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 OPRD1P41143 372 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 PHEXP78562 749 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 ITGADQ13349 1161 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 TP53BP2Q13625 1128 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 ZNF750Q32MQ0 723 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 PERM1Q5SV97 790 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 PIP5KL1Q5T9C9 394 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 CEACAM20Q6UY09 585 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 PDZD3Q86UT5 571 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 MEX3DQ86XN8 651 aaKnown RBP11.88□□□□□ -0.51
HMGN1-220ENST00000492280 SETD9Q8NE22 299 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 OR5D16Q8NGK9 328 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 WFIKKN2Q8TEU8 576 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 FBLIM1Q8WUP2 373 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 ARMC5Q96C12 935 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 REPS1Q96D71 796 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 MAGEB10Q96LZ2 347 aaPredicted RBP11.88□□□□□ -0.51
HMGN1-220ENST00000492280 APOL4Q9BPW4 351 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 YIPF4Q9BSR8 244 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 ANKRA2Q9H9E1 313 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 NAALAD2Q9Y3Q0 740 aa11.88□□□□□ -0.51
HMGN1-220ENST00000492280 TRIM64BA6NI03 449 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 RFXAPO00287 272 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 RGS10O43665 173 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 TMPRSS11DO60235 418 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 NFATC1O95644 943 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 ADRA2AP08913 450 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 CCR3P51677 355 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 MAPK12P53778 367 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 LSM11P83369 360 aaKnown RBP eCLIP11.87□□□□□ -0.51
HMGN1-220ENST00000492280 KEAP1Q14145 624 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 ZC3H12BQ5HYM0 836 aaKnown RBP11.87□□□□□ -0.51
HMGN1-220ENST00000492280 C9orf50Q5SZB4 431 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 CAMKMTQ7Z624 323 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 SLC9B2Q86UD5 537 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 FAM129CQ86XR2 697 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 OR52N2Q8NGI0 321 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 ZNF300Q96RE9 604 aaPredicted RBP11.87□□□□□ -0.51
HMGN1-220ENST00000492280 RPP25Q9BUL9 199 aaKnown RBP11.87□□□□□ -0.51
HMGN1-220ENST00000492280 ACOT13Q9NPJ3 140 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 ITM2CQ9NQX7 267 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 TMEM9Q9P0T7 183 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 TRBC2A0A5B9 178 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 SH3PXD2BA1X283 911 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 OR1F1O43749 312 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 LIPAP38571 399 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 PBX2P40425 430 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 C21orf58P58505 322 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 DOC2BQ14184 412 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 FGL2Q14314 439 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 IFI44LQ53G44 452 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 PNCKQ6P2M8 343 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 PSRC1Q6PGN9 363 aaPredicted RBP11.87□□□□□ -0.51
HMGN1-220ENST00000492280 WDR53Q7Z5U6 358 aaPredicted RBP11.87□□□□□ -0.51
HMGN1-220ENST00000492280 IGFN1Q86VF2 1251 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 C11orf74Q86VG3 221 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 C17orf64Q86WR6 236 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 P3H2Q8IVL5 708 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 PGBD3Q8N328 593 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 SMARCD2Q92925 531 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 RAD51AP1Q96B01 352 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 C17orf62Q9BQA9 187 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 DUSP21Q9H596 190 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 SYNPO2LQ9H987 977 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 ZBTB20Q9HC78 741 aaPredicted RBP11.87□□□□□ -0.51
HMGN1-220ENST00000492280 MYNNQ9NPC7 610 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 LHX9Q9NQ69 397 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 TBC1D23Q9NUY8 699 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 SCN3BQ9NY72 215 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 PMF1-BGLAPU3KQ54 211 aa11.87□□□□□ -0.51
HMGN1-220ENST00000492280 C4orf51C9J302 202 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 SEMA7AO75326 666 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 GJA4P35212 333 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 MANFP55145 182 aaKnown RBP11.86□□□□□ -0.51
HMGN1-220ENST00000492280 PDE7AQ13946 482 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 E2F2Q14209 437 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 VITQ6UXI7 678 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 TMCO5AQ8N6Q1 288 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 TMIEQ8NEW7 156 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 STARD8Q92502 1023 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 PPP1R16AQ96I34 528 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 C12orf66Q96MD2 445 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 GPN2Q9H9Y4 310 aaPredicted RBP11.86□□□□□ -0.51
HMGN1-220ENST00000492280 C11orf16Q9NQ32 467 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 ATAD3AQ9NVI7 634 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 PADI2Q9Y2J8 665 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 TPRKBQ9Y3C4 175 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 CFAP54Q96N23 3096 aa11.86□□□□□ -0.51
HMGN1-220ENST00000492280 FOXE1O00358 373 aaPredicted RBP11.86□□□□□ -0.51
HMGN1-220ENST00000492280 PI15O43692 258 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms