RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 WWP2O00308 870 aa12.78□□□□□ -0.36
ATG4B-222ENST00000491867 NDUFS4O43181 175 aa12.78□□□□□ -0.36
ATG4B-222ENST00000491867 EEF1E1O43324 174 aaKnown RBP12.78□□□□□ -0.36
ATG4B-222ENST00000491867 CEP104O60308 925 aa12.78□□□□□ -0.36
ATG4B-222ENST00000491867 ZNF888P0CJ79 500 aaPredicted RBP12.78□□□□□ -0.36
ATG4B-222ENST00000491867 IMPA1P29218 277 aa12.78□□□□□ -0.36
ATG4B-222ENST00000491867 GPR143P51810 404 aa12.78□□□□□ -0.36
ATG4B-222ENST00000491867 AGFG1P52594 562 aaKnown RBP12.78□□□□□ -0.36
ATG4B-222ENST00000491867 ZNF136P52737 540 aa12.78□□□□□ -0.36
ATG4B-222ENST00000491867 SKP1P63208 163 aa12.78□□□□□ -0.36
ATG4B-222ENST00000491867 TERF2Q15554 542 aa12.78□□□□□ -0.36
ATG4B-222ENST00000491867 ACSF3Q4G176 576 aaPredicted RBP12.78□□□□□ -0.36
ATG4B-222ENST00000491867 HECTD2Q5U5R9 776 aa12.78□□□□□ -0.36
ATG4B-222ENST00000491867 CENPUQ71F23 418 aa12.78□□□□□ -0.36
ATG4B-222ENST00000491867 SPNS2Q8IVW8 549 aa12.78□□□□□ -0.36
ATG4B-222ENST00000491867 MFSD9Q8NBP5 474 aa12.78□□□□□ -0.36
ATG4B-222ENST00000491867 ASB11Q8WXH4 323 aa12.78□□□□□ -0.36
ATG4B-222ENST00000491867 SMPDL3BQ92485 455 aa12.78□□□□□ -0.36
ATG4B-222ENST00000491867 PDLIM2Q96JY6 352 aa12.78□□□□□ -0.36
ATG4B-222ENST00000491867 SCYL1Q96KG9 808 aa12.78□□□□□ -0.36
ATG4B-222ENST00000491867 DACH2Q96NX9 599 aa12.78□□□□□ -0.36
ATG4B-222ENST00000491867 RASL10BQ96S79 203 aa12.78□□□□□ -0.36
ATG4B-222ENST00000491867 SECISBP2Q96T21 854 aaKnown RBP12.78□□□□□ -0.36
ATG4B-222ENST00000491867 EPB41L4BQ9H329 900 aa12.78□□□□□ -0.36
ATG4B-222ENST00000491867 MYOTQ9UBF9 498 aa12.78□□□□□ -0.36
ATG4B-222ENST00000491867 PPIEQ9UNP9 301 aaKnown RBP12.78□□□□□ -0.36
ATG4B-222ENST00000491867 PCDHGB3Q9Y5G1 929 aa12.78□□□□□ -0.36
ATG4B-222ENST00000491867 NINQ8N4C6 2090 aa12.77□□□□□ -0.36
ATG4B-222ENST00000491867 TCRBV7S3A2A0A539 114 aa12.77□□□□□ -0.37
ATG4B-222ENST00000491867 MBD3L4A6NDZ8 208 aaPredicted RBP12.77□□□□□ -0.37
ATG4B-222ENST00000491867 MBD3L5A6NJ08 208 aaPredicted RBP12.77□□□□□ -0.37
ATG4B-222ENST00000491867 CLDN4O14493 209 aa12.77□□□□□ -0.37
ATG4B-222ENST00000491867 CNOT4O95628 575 aaKnown RBP12.77□□□□□ -0.37
ATG4B-222ENST00000491867 EPPINO95925 133 aa12.77□□□□□ -0.37
ATG4B-222ENST00000491867 IFNA2P01563 188 aa12.77□□□□□ -0.37
ATG4B-222ENST00000491867 IL2RAP01589 272 aa12.77□□□□□ -0.37
ATG4B-222ENST00000491867 SERPIND1P05546 499 aa12.77□□□□□ -0.37
ATG4B-222ENST00000491867 CDH1P12830 882 aa12.77□□□□□ -0.37
ATG4B-222ENST00000491867 RNH1P13489 461 aaKnown RBP12.77□□□□□ -0.37
ATG4B-222ENST00000491867 PPP2R1BP30154 601 aa12.77□□□□□ -0.37
ATG4B-222ENST00000491867 TIMP3P35625 211 aa12.77□□□□□ -0.37
ATG4B-222ENST00000491867 GRK3P35626 688 aa12.77□□□□□ -0.37
ATG4B-222ENST00000491867 SKIV2L2P42285 1042 aaKnown RBP12.77□□□□□ -0.37
ATG4B-222ENST00000491867 CLCN7P51798 805 aa12.77□□□□□ -0.37
ATG4B-222ENST00000491867 TBPL1P62380 186 aa12.77□□□□□ -0.37
ATG4B-222ENST00000491867 ARMC3Q5W041 872 aa12.77□□□□□ -0.37
ATG4B-222ENST00000491867 NEPROQ6NW34 567 aa12.77□□□□□ -0.37
ATG4B-222ENST00000491867 PODNL1Q6PEZ8 512 aa12.77□□□□□ -0.37
ATG4B-222ENST00000491867 C17orf64Q86WR6 236 aa12.77□□□□□ -0.37
ATG4B-222ENST00000491867 GIMAP7Q8NHV1 300 aa12.77□□□□□ -0.37
ATG4B-222ENST00000491867 SLC30A3Q99726 388 aa12.77□□□□□ -0.37
ATG4B-222ENST00000491867 SLC6A15Q9H2J7 730 aa12.77□□□□□ -0.37
ATG4B-222ENST00000491867 SACM1LQ9NTJ5 587 aa12.77□□□□□ -0.37
ATG4B-222ENST00000491867 INTS10Q9NVR2 710 aaKnown RBP12.77□□□□□ -0.37
ATG4B-222ENST00000491867 EIF3LQ9Y262 564 aaKnown RBP12.77□□□□□ -0.37
ATG4B-222ENST00000491867 MED12Q93074 2177 aa12.77□□□□□ -0.37
ATG4B-222ENST00000491867 DOCK7Q96N67 2140 aa12.76□□□□□ -0.37
ATG4B-222ENST00000491867 SH3D21A4FU49 640 aa12.76□□□□□ -0.37
ATG4B-222ENST00000491867 AHRRA9YTQ3 701 aa12.76□□□□□ -0.37
ATG4B-222ENST00000491867 AVILO75366 819 aa12.76□□□□□ -0.37
ATG4B-222ENST00000491867 F12P00748 615 aaPredicted RBP12.76□□□□□ -0.37
ATG4B-222ENST00000491867 FGGP02679 453 aa12.76□□□□□ -0.37
ATG4B-222ENST00000491867 P04436 131 aa12.76□□□□□ -0.37
ATG4B-222ENST00000491867 CCL3P10147 92 aa12.76□□□□□ -0.37
ATG4B-222ENST00000491867 PAMP19021 973 aa12.76□□□□□ -0.37
ATG4B-222ENST00000491867 CDC25BP30305 580 aa12.76□□□□□ -0.37
ATG4B-222ENST00000491867 KCNJ1P48048 391 aa12.76□□□□□ -0.37
ATG4B-222ENST00000491867 KRTAP1-1Q07627 177 aa12.76□□□□□ -0.37
ATG4B-222ENST00000491867 PWP1Q13610 501 aa12.76□□□□□ -0.37
ATG4B-222ENST00000491867 KCTD19Q17RG1 926 aaPredicted RBP12.76□□□□□ -0.37
ATG4B-222ENST00000491867 TTLL9Q3SXZ7 439 aa12.76□□□□□ -0.37
ATG4B-222ENST00000491867 ZNF470Q6ECI4 717 aa12.76□□□□□ -0.37
ATG4B-222ENST00000491867 LACC1Q8IV20 430 aa12.76□□□□□ -0.37
ATG4B-222ENST00000491867 PRELID2Q8N945 189 aa12.76□□□□□ -0.37
ATG4B-222ENST00000491867 GOLM1Q8NBJ4 401 aa12.76□□□□□ -0.37
ATG4B-222ENST00000491867 SPC24Q8NBT2 197 aa12.76□□□□□ -0.37
ATG4B-222ENST00000491867 MAIP1Q8WWC4 291 aa12.76□□□□□ -0.37
ATG4B-222ENST00000491867 SGCZQ96LD1 299 aa12.76□□□□□ -0.37
ATG4B-222ENST00000491867 CCL19Q99731 98 aa12.76□□□□□ -0.37
ATG4B-222ENST00000491867 PCBD2Q9H0N5 130 aa12.76□□□□□ -0.37
ATG4B-222ENST00000491867 MED16Q9Y2X0 877 aa12.76□□□□□ -0.37
ATG4B-222ENST00000491867 ATG4BQ9Y4P1 393 aa12.76□□□□□ -0.37
ATG4B-222ENST00000491867 NPFFR2Q9Y5X5 522 aa12.76□□□□□ -0.37
ATG4B-222ENST00000491867 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.76□□□□□ -0.37
ATG4B-222ENST00000491867 GFYI3L273 518 aa12.75□□□□□ -0.37
ATG4B-222ENST00000491867 CASKO14936 926 aa12.75□□□□□ -0.37
ATG4B-222ENST00000491867 OR1F1O43749 312 aa12.75□□□□□ -0.37
ATG4B-222ENST00000491867 ZBTB14O43829 449 aa12.75□□□□□ -0.37
ATG4B-222ENST00000491867 RFPL3SP0C7P2 107 aa12.75□□□□□ -0.37
ATG4B-222ENST00000491867 NID1P14543 1247 aa12.75□□□□□ -0.37
ATG4B-222ENST00000491867 PIGAP37287 484 aa12.75□□□□□ -0.37
ATG4B-222ENST00000491867 MAGEA6P43360 314 aa12.75□□□□□ -0.37
ATG4B-222ENST00000491867 TRPC1P48995 793 aa12.75□□□□□ -0.37
ATG4B-222ENST00000491867 HK2P52789 917 aa12.75□□□□□ -0.37
ATG4B-222ENST00000491867 CUL1Q13616 776 aa12.75□□□□□ -0.37
ATG4B-222ENST00000491867 NIPAL1Q6NVV3 410 aa12.75□□□□□ -0.37
ATG4B-222ENST00000491867 CASC4Q6P4E1 433 aa12.75□□□□□ -0.37
ATG4B-222ENST00000491867 ABHD13Q7L211 337 aa12.75□□□□□ -0.37
ATG4B-222ENST00000491867 NEIL3Q8TAT5 605 aa12.75□□□□□ -0.37
ATG4B-222ENST00000491867 UTP15Q8TED0 518 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms